Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COPB2P35606 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.38□□□□□ -1.87
COPB2P35606 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.38□□□□□ -1.87
COPB2P35606 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COPB2P35606 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.38□□□□□ -1.87
COPB2P35606 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COPB2P35606 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
COPB2P35606 RNU6-140P-201ENST00000384566 108 ntBASIC3.38□□□□□ -1.87
COPB2P35606 MIR620-201ENST00000385232 95 ntBASIC3.38□□□□□ -1.87
COPB2P35606 TXNP7-201ENST00000406296 293 ntBASIC3.38□□□□□ -1.87
COPB2P35606 MIR1284-201ENST00000408337 120 ntBASIC3.38□□□□□ -1.87
COPB2P35606 RNA5SP184-201ENST00000411071 108 ntBASIC3.38□□□□□ -1.87
COPB2P35606 RN7SKP140-201ENST00000411196 284 ntBASIC3.38□□□□□ -1.87
COPB2P35606 VN1R51P-201ENST00000411675 945 ntBASIC3.38□□□□□ -1.87
COPB2P35606 RPS15AP7-201ENST00000439294 405 ntBASIC3.38□□□□□ -1.87
COPB2P35606 OR10R1P-201ENST00000441524 1141 ntBASIC3.38□□□□□ -1.87
COPB2P35606 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.38□□□□□ -1.87
COPB2P35606 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
COPB2P35606 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.38□□□□□ -1.87
COPB2P35606 RPS20P22-201ENST00000473700 357 ntBASIC3.38□□□□□ -1.87
COPB2P35606 AC126182.1-201ENST00000478134 357 ntBASIC3.38□□□□□ -1.87
COPB2P35606 AIG1P1-201ENST00000503376 148 ntBASIC3.38□□□□□ -1.87
COPB2P35606 MTND3P3-201ENST00000505004 126 ntBASIC3.38□□□□□ -1.87
COPB2P35606 SUMO2P6-201ENST00000505273 288 ntBASIC3.38□□□□□ -1.87
COPB2P35606 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.38□□□□□ -1.87
COPB2P35606 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.38□□□□□ -1.87
COPB2P35606 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.38□□□□□ -1.87
COPB2P35606 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.38□□□□□ -1.87
COPB2P35606 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.38□□□□□ -1.87
COPB2P35606 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.38□□□□□ -1.87
COPB2P35606 AC005951.2-201ENST00000576282 495 ntBASIC3.38□□□□□ -1.87
COPB2P35606 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.38□□□□□ -1.87
COPB2P35606 AL121652.1-201ENST00000608851 448 ntBASIC3.38□□□□□ -1.87
COPB2P35606 AC245517.5-201ENST00000611529 162 ntBASIC3.38□□□□□ -1.87
COPB2P35606 AC008498.1-201ENST00000613012 531 ntBASIC3.38□□□□□ -1.87
COPB2P35606 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.38□□□□□ -1.87
COPB2P35606 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.37□□□□□ -1.87
COPB2P35606 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.37□□□□□ -1.87
COPB2P35606 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.37□□□□□ -1.87
COPB2P35606 AC009487.2-201ENST00000420969 6821 ntBASIC3.37□□□□□ -1.87
COPB2P35606 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
COPB2P35606 RNU6-223P-201ENST00000362830 107 ntBASIC3.37□□□□□ -1.87
COPB2P35606 U3.6-201ENST00000363622 211 ntBASIC3.37□□□□□ -1.87
COPB2P35606 U3.11-201ENST00000364476 212 ntBASIC3.37□□□□□ -1.87
COPB2P35606 Y_RNA.311-201ENST00000365068 96 ntBASIC3.37□□□□□ -1.87
COPB2P35606 RNU6-754P-201ENST00000391166 107 ntBASIC3.37□□□□□ -1.87
COPB2P35606 AL109755.1-201ENST00000401791 649 ntBASIC3.37□□□□□ -1.87
COPB2P35606 RNU2-33P-201ENST00000410344 192 ntBASIC3.37□□□□□ -1.87
COPB2P35606 USP9YP11-201ENST00000427537 717 ntBASIC3.37□□□□□ -1.87
COPB2P35606 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.37□□□□□ -1.87
COPB2P35606 Z80107.1-201ENST00000436830 412 ntBASIC3.37□□□□□ -1.87
COPB2P35606 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.37□□□□□ -1.87
COPB2P35606 GAPDHP27-201ENST00000447427 1020 ntBASIC3.37□□□□□ -1.87
COPB2P35606 MTND1P31-201ENST00000449206 961 ntBASIC3.37□□□□□ -1.87
COPB2P35606 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.37□□□□□ -1.87
COPB2P35606 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.37□□□□□ -1.87
COPB2P35606 RN7SL20P-201ENST00000488827 297 ntBASIC3.37□□□□□ -1.87
COPB2P35606 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.37□□□□□ -1.87
COPB2P35606 SNORA31.18-201ENST00000517043 134 ntBASIC3.37□□□□□ -1.87
COPB2P35606 AC022634.1-201ENST00000520765 532 ntBASIC3.37□□□□□ -1.87
COPB2P35606 AP003497.1-201ENST00000528472 562 ntBASIC3.37□□□□□ -1.87
COPB2P35606 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.37□□□□□ -1.87
COPB2P35606 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.37□□□□□ -1.87
COPB2P35606 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.37□□□□□ -1.87
COPB2P35606 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.37□□□□□ -1.87
COPB2P35606 AC138761.3-201ENST00000579993 334 ntBASIC3.37□□□□□ -1.87
COPB2P35606 AC024153.1-201ENST00000603103 365 ntBASIC3.37□□□□□ -1.87
COPB2P35606 AC010133.1-201ENST00000615809 842 ntBASIC3.37□□□□□ -1.87
COPB2P35606 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.37□□□□□ -1.87
COPB2P35606 AC009269.6-201ENST00000621778 588 ntBASIC3.37□□□□□ -1.87
COPB2P35606 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COPB2P35606 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COPB2P35606 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COPB2P35606 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.37□□□□□ -1.87
COPB2P35606 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
COPB2P35606 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
COPB2P35606 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
COPB2P35606 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COPB2P35606 RNU6-432P-201ENST00000384196 109 ntBASIC3.36□□□□□ -1.87
COPB2P35606 U3.20-201ENST00000390909 217 ntBASIC3.36□□□□□ -1.87
COPB2P35606 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COPB2P35606 AL953862.1-201ENST00000423016 168 ntBASIC3.36□□□□□ -1.87
COPB2P35606 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.36□□□□□ -1.87
COPB2P35606 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.36□□□□□ -1.87
COPB2P35606 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.36□□□□□ -1.87
COPB2P35606 PAXBP1P1-201ENST00000449315 447 ntBASIC3.36□□□□□ -1.87
COPB2P35606 MTND2P39-201ENST00000457230 764 ntBASIC3.36□□□□□ -1.87
COPB2P35606 MEMO1P3-201ENST00000459811 302 ntBASIC3.36□□□□□ -1.87
COPB2P35606 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.36□□□□□ -1.87
COPB2P35606 RNA5SP471-201ENST00000516971 106 ntBASIC3.36□□□□□ -1.87
COPB2P35606 NRON-201ENST00000517270 370 ntBASIC3.36□□□□□ -1.87
COPB2P35606 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
COPB2P35606 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.36□□□□□ -1.87
COPB2P35606 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.36□□□□□ -1.87
COPB2P35606 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.36□□□□□ -1.87
COPB2P35606 TMF1P1-201ENST00000576058 373 ntBASIC3.36□□□□□ -1.87
COPB2P35606 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.36□□□□□ -1.87
COPB2P35606 HMGN2P15-201ENST00000585707 270 ntBASIC3.36□□□□□ -1.87
COPB2P35606 AL139344.1-201ENST00000605228 195 ntBASIC3.36□□□□□ -1.87
COPB2P35606 ATP1B3P1-201ENST00000605365 821 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms