Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 OR5B19P-201ENST00000531766 928 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC6A4P31645 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.11□□□□□ -1.75
SLC6A4P31645 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC6A4P31645 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.11□□□□□ -1.75
SLC6A4P31645 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC6A4P31645 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC6A4P31645 AC123904.3-201ENST00000547218 814 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.11□□□□□ -1.75
SLC6A4P31645 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC6A4P31645 AL138976.2-201ENST00000563989 694 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 MIR4775-201ENST00000581168 75 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AC010525.2-201ENST00000590920 195 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AC104662.1-201ENST00000604448 511 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AC091167.4-201ENST00000605079 184 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AL592436.1-201ENST00000605135 558 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AC012443.1-201ENST00000605605 231 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 TUG1_2.1-201ENST00000614234 87 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 MIR6075-201ENST00000620782 95 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AL359697.1-201ENST00000624879 587 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC6A4P31645 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC6A4P31645 U6.114-201ENST00000636407 96 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
SLC6A4P31645 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC6A4P31645 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC6A4P31645 BDP1P-201ENST00000582658 1990 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC6A4P31645 AC016588.2-201ENST00000632484 3021 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC6A4P31645 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC6A4P31645 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC6A4P31645 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC6A4P31645 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC6A4P31645 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC6A4P31645 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC6A4P31645 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC6A4P31645 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC6A4P31645 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC6A4P31645 SNORA62.1-201ENST00000364287 154 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 RNU4-76P-201ENST00000364509 141 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 RHOT1P2-201ENST00000366423 333 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 RNU6-213P-201ENST00000384051 104 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 MIR670-201ENST00000390142 98 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 RNU2-36P-201ENST00000410361 191 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 EEF1A1P40-201ENST00000412883 573 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 AC004552.1-201ENST00000419089 348 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.1□□□□□ -1.75
SLC6A4P31645 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A4P31645 MTCO3P45-201ENST00000443036 613 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC6A4P31645 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC6A4P31645 AC008481.1-201ENST00000463278 396 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 RPS26P3-201ENST00000470205 348 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 AC090543.2-201ENST00000483963 348 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 RN7SL432P-201ENST00000484057 298 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 AC004057.1-201ENST00000485827 348 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A4P31645 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A4P31645 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC6A4P31645 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A4P31645 RNA5SP503-201ENST00000517047 117 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A4P31645 SUB1P1-201ENST00000524415 382 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 DEFB109D-201ENST00000529497 240 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A4P31645 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC6A4P31645 MIR4444-1-201ENST00000581696 74 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 SNORD84-203ENST00000584275 78 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 MIR4444-2-201ENST00000584390 74 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 AC008638.3-201ENST00000603341 463 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 AL034351.1-201ENST00000605288 668 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 AL773545.4-201ENST00000637262 310 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 AL513478.4-201ENST00000641636 310 ntBASIC4.1□□□□□ -1.75
SLC6A4P31645 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SLC6A4P31645 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SLC6A4P31645 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SLC6A4P31645 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SLC6A4P31645 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SLC6A4P31645 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
SLC6A4P31645 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC6A4P31645 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SLC6A4P31645 MIR135A2-201ENST00000384854 100 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 MIR93-201ENST00000385024 80 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 RNU6-510P-201ENST00000391239 108 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC6A4P31645 MTCO3P46-201ENST00000425787 232 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC6A4P31645 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC6A4P31645 AL353748.1-201ENST00000440753 474 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC6A4P31645 FGF7P3-201ENST00000454645 303 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 AMD1P1-201ENST00000457220 922 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 RPL7L1P8-201ENST00000469911 741 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.09□□□□□ -1.75
SLC6A4P31645 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SLC6A4P31645 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC6A4P31645 RN7SKP219-201ENST00000516825 296 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 RNU6-352P-201ENST00000516908 107 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 IGKV2-38-201ENST00000517443 247 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms