Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.41□□□□□ -2.02
CASQ1P31415 RNA5SP125-201ENST00000364843 120 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CASQ1P31415 MIR218-1-201ENST00000384999 110 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 AL133264.1-201ENST00000407157 562 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 RNU2-40P-201ENST00000410833 196 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 RN7SKP140-201ENST00000411196 284 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.41□□□□□ -2.02
CASQ1P31415 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.41□□□□□ -2.02
CASQ1P31415 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.41□□□□□ -2.02
CASQ1P31415 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.41□□□□□ -2.02
CASQ1P31415 ARL5AP4-201ENST00000430731 512 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 AC234064.1-201ENST00000436312 247 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.41□□□□□ -2.02
CASQ1P31415 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.41□□□□□ -2.02
CASQ1P31415 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 AL121769.1-201ENST00000469473 401 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 AC109486.1-201ENST00000486833 374 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.41□□□□□ -2.02
CASQ1P31415 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.41□□□□□ -2.02
CASQ1P31415 COX6CP8-201ENST00000522620 226 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.41□□□□□ -2.02
CASQ1P31415 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.41□□□□□ -2.02
CASQ1P31415 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.41□□□□□ -2.02
CASQ1P31415 AL020997.2-201ENST00000602607 184 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 AL109618.2-201ENST00000605527 211 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CASQ1P31415 AC091932.3-201ENST00000624223 323 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.41□□□□□ -2.02
CASQ1P31415 AL590396.4-201ENST00000636779 956 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 OR8B1P-202ENST00000641132 1178 ntBASIC2.41□□□□□ -2.02
CASQ1P31415 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
CASQ1P31415 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.4□□□□□ -2.02
CASQ1P31415 RNU6-657P-201ENST00000383904 107 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CASQ1P31415 RNU2-52P-201ENST00000410680 190 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 RN7SKP27-201ENST00000410684 333 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 AC092634.6-201ENST00000418558 192 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 AC246680.2-201ENST00000422106 389 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 MYL8P-204ENST00000431574 518 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.4□□□□□ -2.03
CASQ1P31415 GTF2IP12-201ENST00000456547 356 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 SNORA84-201ENST00000459229 133 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.4□□□□□ -2.03
CASQ1P31415 SNORA31.25-201ENST00000517242 134 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.4□□□□□ -2.03
CASQ1P31415 AC021269.2-201ENST00000532318 330 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.4□□□□□ -2.03
CASQ1P31415 AL133241.1-201ENST00000556832 487 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 HSPE1P3-201ENST00000559254 309 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 MIR4325-201ENST00000583049 90 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.4□□□□□ -2.03
CASQ1P31415 AC010678.1-201ENST00000614118 713 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 uc_338.20-201ENST00000621563 178 ntBASIC2.4□□□□□ -2.03
CASQ1P31415 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.4□□□□□ -2.03
CASQ1P31415 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.39□□□□□ -2.03
CASQ1P31415 RNU6-839P-201ENST00000363347 108 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 RNU6-140P-201ENST00000384566 108 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 MIR888-201ENST00000401186 77 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.39□□□□□ -2.03
CASQ1P31415 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 MTCO3P1-205ENST00000422088 832 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.39□□□□□ -2.03
CASQ1P31415 RAC1P8-201ENST00000427086 527 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 AC093106.2-201ENST00000428212 385 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.39□□□□□ -2.03
CASQ1P31415 MTND4LP7-201ENST00000431728 294 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.39□□□□□ -2.03
CASQ1P31415 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.39□□□□□ -2.03
CASQ1P31415 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.39□□□□□ -2.03
CASQ1P31415 AC080013.2-201ENST00000460866 323 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 FTH1P2-201ENST00000466086 412 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 RPL21P47-201ENST00000483696 477 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.39□□□□□ -2.03
CASQ1P31415 AC026801.2-201ENST00000515352 425 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 RN7SKP132-201ENST00000516001 208 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 RNU1-40P-201ENST00000516816 164 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 RNU1-97P-201ENST00000516872 164 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 RNU2-19P-201ENST00000517288 84 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 OR5AQ1P-201ENST00000527596 927 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 AL132857.1-201ENST00000555180 708 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 CYCSP2-201ENST00000558168 301 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.39□□□□□ -2.03
CASQ1P31415 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 AP000403.1-201ENST00000603349 851 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 AC092954.1-201ENST00000609121 445 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 AC107294.1-201ENST00000609524 467 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 AC098657.3-201ENST00000620434 263 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 AP002791.1-201ENST00000623291 381 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.39□□□□□ -2.03
CASQ1P31415 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CASQ1P31415 AL365361.1-201ENST00000566942 3481 ntBASIC2.39□□□□□ -2.03
CASQ1P31415 SNORA71.3-201ENST00000362582 128 ntBASIC2.38□□□□□ -2.03
CASQ1P31415 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CASQ1P31415 AL450338.1-201ENST00000407987 512 ntBASIC2.38□□□□□ -2.03
CASQ1P31415 HMGB1P11-201ENST00000413899 637 ntBASIC2.38□□□□□ -2.03
CASQ1P31415 AC003685.2-201ENST00000422795 395 ntBASIC2.38□□□□□ -2.03
CASQ1P31415 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CASQ1P31415 MED14P1-201ENST00000430517 648 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms