Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC073587.1-201ENST00000447093 876 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC12P31275 AC010285.1-201ENST00000470580 392 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 RN7SL319P-201ENST00000480656 221 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXC12P31275 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC12P31275 IGKV2D-23-201ENST00000518179 286 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 AC087854.1-201ENST00000519706 414 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC12P31275 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.44□□□□□ -1.7
HOXC12P31275 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC12P31275 AP006289.1-201ENST00000538089 277 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 TOMM20P2-201ENST00000540082 421 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 AC026371.1-201ENST00000551867 419 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXC12P31275 SNRPGP15-201ENST00000600149 222 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 AC002044.1-201ENST00000606707 158 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 PISRT1.1-201ENST00000616930 107 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 AL669831.3-213ENST00000636676 183 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 ZNF285B-201ENST00000561698 1767 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 AC107068.1-201ENST00000563286 4218 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 AC025031.4-201ENST00000621248 3271 ntBASIC4.44□□□□□ -1.7
HOXC12P31275 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HOXC12P31275 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC12P31275 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXC12P31275 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC12P31275 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC12P31275 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC12P31275 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC12P31275 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC12P31275 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC12P31275 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC12P31275 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC12P31275 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HOXC12P31275 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC12P31275 NEAT1-202ENST00000501122 22743 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC12P31275 AC006971.1-201ENST00000407916 4486 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC12P31275 UBE2L2-201ENST00000254302 429 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 SNORA73.1-201ENST00000363107 205 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 RNU6-593P-201ENST00000364716 112 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 RNU6-1303P-201ENST00000364841 107 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 LAP3P1-201ENST00000403648 294 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 RNU4-25P-201ENST00000410569 230 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXC12P31275 E2F6P2-201ENST00000420708 748 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC12P31275 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC12P31275 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXC12P31275 AC073264.2-201ENST00000448886 166 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXC12P31275 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXC12P31275 AL356981.1-201ENST00000454879 684 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 RN7SL354P-201ENST00000469282 294 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXC12P31275 AC110792.1-201ENST00000491826 472 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC12P31275 AC140172.1-201ENST00000502928 141 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 SMURF2P1-201ENST00000514992 481 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 RNU6-927P-201ENST00000516199 100 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 RNU6-1016P-201ENST00000516689 94 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 RNU1-54P-201ENST00000517181 120 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXC12P31275 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC12P31275 SNRPGP16-201ENST00000533275 226 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC12P31275 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC12P31275 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXC12P31275 AC025423.5-201ENST00000550230 219 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC12P31275 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXC12P31275 AC022968.1-201ENST00000567372 442 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 AC136624.4-201ENST00000573044 370 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 MIR4691-201ENST00000583764 85 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC12P31275 AC005255.1-201ENST00000593748 216 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 AC008737.2-201ENST00000599446 118 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC12P31275 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC12P31275 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC12P31275 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC12P31275 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.43□□□□□ -1.7
HOXC12P31275 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC12P31275 OR4G2P-202ENST00000641004 1759 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXC12P31275 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HOXC12P31275 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HOXC12P31275 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 RNU6-335P-201ENST00000364563 113 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 RNA5SP505-201ENST00000364748 108 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 RNU6-639P-201ENST00000384074 107 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 RNU6-214P-201ENST00000384130 107 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 Y_RNA.646-201ENST00000410980 101 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 AC063979.1-201ENST00000415539 377 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms