Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL161734.1-201ENST00000609720 557 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AC073968.1-201ENST00000618594 637 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AC006386.1-201ENST00000619436 415 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXA9P31269 AL359757.2-201ENST00000624309 274 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 MTND2P41-201ENST00000637599 773 ntBASIC2.64□□□□□ -1.99
HOXA9P31269 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXA9P31269 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXA9P31269 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXA9P31269 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HOXA9P31269 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
HOXA9P31269 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HOXA9P31269 RNA5SP289-201ENST00000362332 137 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 RNU4-92P-201ENST00000363783 136 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 SNORD82-201ENST00000365530 70 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
HOXA9P31269 RNU6-821P-201ENST00000390995 107 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 AL356057.2-201ENST00000403318 432 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 AL024474.1-201ENST00000404655 591 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 AL590084.1-201ENST00000407885 387 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXA9P31269 RNA5SP425-201ENST00000410336 112 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 AL592310.1-201ENST00000414330 671 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 AC080125.1-201ENST00000414888 684 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 AL356320.1-201ENST00000429616 163 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 FCF1P1-201ENST00000432690 571 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 UBE2D3P1-201ENST00000436669 444 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXA9P31269 TRGVB-201ENST00000453257 471 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 USP9YP25-201ENST00000457708 443 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXA9P31269 AC126182.1-201ENST00000478134 357 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 HMGB1P28-201ENST00000507778 552 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 AC010460.2-201ENST00000509054 677 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXA9P31269 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXA9P31269 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXA9P31269 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXA9P31269 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXA9P31269 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.63□□□□□ -1.99
HOXA9P31269 ELOCP31-201ENST00000540463 467 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 HIGD1AP17-201ENST00000554576 276 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
HOXA9P31269 AGGF1P5-201ENST00000567900 919 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 MIR4760-201ENST00000585040 80 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 AC008739.2-201ENST00000597006 317 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 DUXAP3-201ENST00000603616 594 ntBASIC2.63□□□□□ -1.99
HOXA9P31269 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
HOXA9P31269 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXA9P31269 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HOXA9P31269 AC099786.3-201ENST00000565735 1410 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 Y_RNA.192-201ENST00000363977 102 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 RNU6-636P-201ENST00000384598 107 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 MIR627-201ENST00000384979 97 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 U3.29-201ENST00000391296 212 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 SNRPEP2-201ENST00000397592 279 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.62□□□□□ -1.99
HOXA9P31269 AC092447.6-201ENST00000414578 210 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXA9P31269 RPL36AP6-201ENST00000435770 321 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXA9P31269 AC010095.1-201ENST00000443543 144 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXA9P31269 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXA9P31269 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.62□□□□□ -1.99
HOXA9P31269 MRPL50P4-201ENST00000446432 475 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXA9P31269 RN7SL636P-201ENST00000497504 294 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXA9P31269 AC234781.5-201ENST00000508429 271 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXA9P31269 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXA9P31269 RN7SKP40-201ENST00000517211 242 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXA9P31269 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXA9P31269 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HOXA9P31269 AC008127.2-201ENST00000549925 1075 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXA9P31269 U6.101-201ENST00000637707 76 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 AC016717.2-201ENST00000609089 5141 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXA9P31269 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
HOXA9P31269 MTCO1P23-201ENST00000415223 1526 ntBASIC2.62□□□□□ -1.99
HOXA9P31269 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXA9P31269 ZNF519P1-201ENST00000449011 1626 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 CDR1-202ENST00000625883 1485 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 AL161431.1-201ENST00000618966 4205 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXA9P31269 RNA5SP456-201ENST00000364002 114 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXA9P31269 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXA9P31269 Z98742.3-201ENST00000418637 326 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXA9P31269 USP9YP11-201ENST00000427537 717 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 ATP5F1P1-201ENST00000433775 569 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 Z80107.1-201ENST00000436830 412 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 MTCO2P20-201ENST00000437339 673 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms