Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SNORD116-29-201ENST00000384516 83 ntBASIC4.06□□□□□ -1.76
CD40P25942 MIR141-201ENST00000384975 95 ntBASIC4.06□□□□□ -1.76
CD40P25942 RNA5SP397-201ENST00000391323 118 ntBASIC4.06□□□□□ -1.76
CD40P25942 RNU6-370P-201ENST00000411008 104 ntBASIC4.06□□□□□ -1.76
CD40P25942 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.06□□□□□ -1.76
CD40P25942 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.06□□□□□ -1.76
CD40P25942 AC005534.2-201ENST00000431047 433 ntBASIC4.06□□□□□ -1.76
CD40P25942 VDAC1P3-201ENST00000434069 851 ntBASIC4.06□□□□□ -1.76
CD40P25942 AC073063.1-201ENST00000434352 607 ntBASIC4.06□□□□□ -1.76
CD40P25942 ARL2BPP10-201ENST00000446487 531 ntBASIC4.06□□□□□ -1.76
CD40P25942 MTND1P17-201ENST00000448961 204 ntBASIC4.06□□□□□ -1.76
CD40P25942 AL162591.2-201ENST00000449634 317 ntBASIC4.06□□□□□ -1.76
CD40P25942 snoU13.1-201ENST00000459157 104 ntBASIC4.06□□□□□ -1.76
CD40P25942 RN7SL481P-201ENST00000477764 299 ntBASIC4.06□□□□□ -1.76
CD40P25942 RPL31P13-201ENST00000484151 370 ntBASIC4.06□□□□□ -1.76
CD40P25942 CEACAMP10-202ENST00000495431 496 ntBASIC4.06□□□□□ -1.76
CD40P25942 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.06□□□□□ -1.76
CD40P25942 AC025164.1-201ENST00000496249 478 ntBASIC4.06□□□□□ -1.76
CD40P25942 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CD40P25942 OR51K1P-201ENST00000510214 950 ntBASIC4.06□□□□□ -1.76
CD40P25942 RNU6-1315P-201ENST00000517187 99 ntBASIC4.06□□□□□ -1.76
CD40P25942 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.06□□□□□ -1.76
CD40P25942 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.06□□□□□ -1.76
CD40P25942 AL627309.6-201ENST00000606857 840 ntBASIC4.06□□□□□ -1.76
CD40P25942 AC084781.2-201ENST00000615568 161 ntBASIC4.06□□□□□ -1.76
CD40P25942 AC073869.10-201ENST00000642016 354 ntBASIC4.06□□□□□ -1.76
CD40P25942 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CD40P25942 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.06□□□□□ -1.76
CD40P25942 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
CD40P25942 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
CD40P25942 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD40P25942 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CD40P25942 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD40P25942 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.06□□□□□ -1.76
CD40P25942 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD40P25942 ZNF519P1-201ENST00000449011 1626 ntBASIC4.06□□□□□ -1.76
CD40P25942 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD40P25942 NOL8P1-201ENST00000508336 3529 ntBASIC4.05□□□□□ -1.76
CD40P25942 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CD40P25942 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 AC100778.3-201ENST00000580060 1750 ntBASIC4.05□□□□□ -1.76
CD40P25942 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 RNU6-562P-201ENST00000362731 107 ntBASIC4.05□□□□□ -1.76
CD40P25942 Y_RNA.135-201ENST00000363439 95 ntBASIC4.05□□□□□ -1.76
CD40P25942 Y_RNA.138-201ENST00000363462 102 ntBASIC4.05□□□□□ -1.76
CD40P25942 Y_RNA.315-201ENST00000365117 102 ntBASIC4.05□□□□□ -1.76
CD40P25942 MIR301A-201ENST00000385261 86 ntBASIC4.05□□□□□ -1.76
CD40P25942 Y_RNA.579-201ENST00000390939 94 ntBASIC4.05□□□□□ -1.76
CD40P25942 U3.35-201ENST00000408405 208 ntBASIC4.05□□□□□ -1.76
CD40P25942 E2F6P2-201ENST00000420708 748 ntBASIC4.05□□□□□ -1.76
CD40P25942 RPL23AP69-201ENST00000431134 458 ntBASIC4.05□□□□□ -1.76
CD40P25942 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.05□□□□□ -1.76
CD40P25942 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.05□□□□□ -1.76
CD40P25942 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.05□□□□□ -1.76
CD40P25942 FABP5P14-201ENST00000437273 393 ntBASIC4.05□□□□□ -1.76
CD40P25942 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.05□□□□□ -1.76
CD40P25942 AC004938.1-201ENST00000438468 308 ntBASIC4.05□□□□□ -1.76
CD40P25942 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.05□□□□□ -1.76
CD40P25942 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.05□□□□□ -1.76
CD40P25942 RPL36AP41-201ENST00000493820 306 ntBASIC4.05□□□□□ -1.76
CD40P25942 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.05□□□□□ -1.76
CD40P25942 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.05□□□□□ -1.76
CD40P25942 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.05□□□□□ -1.76
CD40P25942 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.05□□□□□ -1.76
CD40P25942 RNA5SP249-201ENST00000516127 99 ntBASIC4.05□□□□□ -1.76
CD40P25942 Y_RNA.718-201ENST00000517110 102 ntBASIC4.05□□□□□ -1.76
CD40P25942 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.05□□□□□ -1.76
CD40P25942 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.05□□□□□ -1.76
CD40P25942 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CD40P25942 CYCSP40-201ENST00000575927 294 ntBASIC4.05□□□□□ -1.76
CD40P25942 AC209154.1-201ENST00000582156 337 ntBASIC4.05□□□□□ -1.76
CD40P25942 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.05□□□□□ -1.76
CD40P25942 AL133215.3-201ENST00000609801 448 ntBASIC4.05□□□□□ -1.76
CD40P25942 U3.53-201ENST00000628922 216 ntBASIC4.05□□□□□ -1.76
CD40P25942 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CD40P25942 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD40P25942 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.04□□□□□ -1.76
CD40P25942 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD40P25942 USP8P1-201ENST00000494673 3183 ntBASIC4.04□□□□□ -1.76
CD40P25942 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.04□□□□□ -1.76
CD40P25942 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.04□□□□□ -1.76
CD40P25942 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.04□□□□□ -1.76
CD40P25942 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD40P25942 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.04□□□□□ -1.76
CD40P25942 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD40P25942 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD40P25942 Y_RNA.245-201ENST00000364493 95 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms