Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.88□□□□□ -1.63
ATP2B1P20020 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ATP2B1P20020 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATP2B1P20020 OR4G1P-203ENST00000641984 1631 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 AC126755.2-208ENST00000327792 462 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 AC138969.1-213ENST00000331436 462 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 SNORA72.1-201ENST00000363485 129 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 RNA5SP509-201ENST00000364577 119 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 UBE2V1P2-201ENST00000397758 440 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 AL606923.1-201ENST00000406616 190 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATP2B1P20020 RNU6-193P-201ENST00000410977 107 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.88□□□□□ -1.63
ATP2B1P20020 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.88□□□□□ -1.63
ATP2B1P20020 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.88□□□□□ -1.63
ATP2B1P20020 ELOCP23-201ENST00000452014 332 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 RPL21P8-201ENST00000465083 535 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 AC139783.2-201ENST00000504847 1145 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
ATP2B1P20020 AC117522.3-201ENST00000507974 584 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.88□□□□□ -1.63
ATP2B1P20020 RNA5SP519-201ENST00000516480 119 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 RNU6-1256P-201ENST00000516539 103 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 RNU6-685P-201ENST00000517088 95 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.88□□□□□ -1.63
ATP2B1P20020 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.88□□□□□ -1.63
ATP2B1P20020 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.88□□□□□ -1.63
ATP2B1P20020 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.88□□□□□ -1.63
ATP2B1P20020 TVP23BP1-201ENST00000557500 617 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.88□□□□□ -1.63
ATP2B1P20020 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.88□□□□□ -1.63
ATP2B1P20020 BNIP3P10-201ENST00000605360 577 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 AC034102.8-201ENST00000615146 484 ntBASIC4.88□□□□□ -1.63
ATP2B1P20020 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ATP2B1P20020 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ATP2B1P20020 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
ATP2B1P20020 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATP2B1P20020 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.87□□□□□ -1.63
ATP2B1P20020 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATP2B1P20020 TPTE2P4-201ENST00000258589 1605 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 Z82217.1-201ENST00000625157 8149 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
ATP2B1P20020 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATP2B1P20020 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATP2B1P20020 RPL32P3-201ENST00000359025 275 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 Y_RNA.160-201ENST00000363677 92 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.87□□□□□ -1.63
ATP2B1P20020 AL356776.1-201ENST00000406574 447 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 RNU4-46P-201ENST00000410818 138 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 AC011933.1-201ENST00000413334 321 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.87□□□□□ -1.63
ATP2B1P20020 AL157831.1-201ENST00000426134 473 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 AL591212.2-201ENST00000433923 257 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 MTND3P16-201ENST00000452205 344 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 AC116533.1-201ENST00000459748 321 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 AC087588.1-201ENST00000462203 316 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 AC146944.2-203ENST00000502493 354 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 AC139495.1-202ENST00000513164 354 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 SNORA20.3-201ENST00000516880 132 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.87□□□□□ -1.63
ATP2B1P20020 AC006064.5-201ENST00000541782 248 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.87□□□□□ -1.63
ATP2B1P20020 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATP2B1P20020 AL121576.1-201ENST00000556055 276 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATP2B1P20020 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 MIR6758-201ENST00000620653 63 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 AC006504.8-201ENST00000621046 635 ntBASIC4.87□□□□□ -1.63
ATP2B1P20020 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATP2B1P20020 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
ATP2B1P20020 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.86□□□□□ -1.63
ATP2B1P20020 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATP2B1P20020 AC008568.2-201ENST00000623862 2313 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATP2B1P20020 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.86□□□□□ -1.63
ATP2B1P20020 RNU6-550P-201ENST00000391057 101 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 AL078595.1-201ENST00000404458 226 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 RNU4-25P-201ENST00000410569 230 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 RNA5SP111-201ENST00000411386 101 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 RPS12P24-201ENST00000412619 387 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 AC092809.3-201ENST00000415453 231 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.86□□□□□ -1.63
ATP2B1P20020 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.86□□□□□ -1.63
ATP2B1P20020 AC091390.3-201ENST00000426478 338 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 AL590383.1-201ENST00000428602 75 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.86□□□□□ -1.63
ATP2B1P20020 RPL36AP53-201ENST00000432891 316 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 AL132765.1-201ENST00000434165 553 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 HLA-N-201ENST00000437516 135 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 RPL37P6-201ENST00000460682 294 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 RPS29P19-201ENST00000479709 171 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 AC104164.2-201ENST00000496953 495 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.86□□□□□ -1.63
ATP2B1P20020 RNA5SP49-201ENST00000516450 115 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 RANP9-201ENST00000519957 271 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.86□□□□□ -1.63
ATP2B1P20020 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.86□□□□□ -1.63
ATP2B1P20020 AL138889.2-201ENST00000603883 242 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 AC022893.3-201ENST00000607665 437 ntBASIC4.86□□□□□ -1.63
ATP2B1P20020 AP003122.6-201ENST00000623831 495 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms