Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC016727.2-201ENST00000603988 621 ntBASIC1.96□□□□□ -2.09
TOP2AP11388 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.96□□□□□ -2.1
TOP2AP11388 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
TOP2AP11388 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TOP2AP11388 HMGB1P5-201ENST00000255320 642 ntBASIC1.96□□□□□ -2.1
TOP2AP11388 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.96□□□□□ -2.1
TOP2AP11388 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.96□□□□□ -2.1
TOP2AP11388 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.96□□□□□ -2.1
TOP2AP11388 SNORA31.23-201ENST00000517219 133 ntBASIC1.96□□□□□ -2.1
TOP2AP11388 AC019176.1-201ENST00000518519 225 ntBASIC1.96□□□□□ -2.1
TOP2AP11388 MIR524-201ENST00000385242 87 ntBASIC1.95□□□□□ -2.1
TOP2AP11388 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.95□□□□□ -2.1
TOP2AP11388 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
TOP2AP11388 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.95□□□□□ -2.1
TOP2AP11388 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.95□□□□□ -2.1
TOP2AP11388 AC123912.5-201ENST00000605470 343 ntBASIC1.95□□□□□ -2.1
TOP2AP11388 AC098657.3-201ENST00000620434 263 ntBASIC1.95□□□□□ -2.1
TOP2AP11388 AL031601.2-202ENST00000622650 282 ntBASIC1.95□□□□□ -2.1
TOP2AP11388 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.95□□□□□ -2.1
TOP2AP11388 AL355497.1-201ENST00000406262 551 ntBASIC1.94□□□□□ -2.1
TOP2AP11388 CDC42P4-201ENST00000510507 563 ntBASIC1.94□□□□□ -2.1
TOP2AP11388 FABP5P5-201ENST00000515537 406 ntBASIC1.94□□□□□ -2.1
TOP2AP11388 RNU2-44P-201ENST00000516795 194 ntBASIC1.94□□□□□ -2.1
TOP2AP11388 DNAJC8P1-201ENST00000554535 372 ntBASIC1.94□□□□□ -2.1
TOP2AP11388 AC090897.2-201ENST00000581715 130 ntBASIC1.94□□□□□ -2.1
TOP2AP11388 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.94□□□□□ -2.1
TOP2AP11388 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TOP2AP11388 AC008962.1-201ENST00000605729 304 ntBASIC1.94□□□□□ -2.1
TOP2AP11388 AL161734.1-201ENST00000609720 557 ntBASIC1.94□□□□□ -2.1
TOP2AP11388 MIR7974-201ENST00000615835 79 ntBASIC1.94□□□□□ -2.1
TOP2AP11388 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.94□□□□□ -2.1
TOP2AP11388 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TOP2AP11388 NR1H5P-201ENST00000452683 1377 ntBASIC1.94□□□□□ -2.1
TOP2AP11388 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TOP2AP11388 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TOP2AP11388 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.93□□□□□ -2.1
TOP2AP11388 AC005297.2-201ENST00000450430 606 ntBASIC1.93□□□□□ -2.1
TOP2AP11388 ATG12P2-201ENST00000456830 416 ntBASIC1.93□□□□□ -2.1
TOP2AP11388 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.93□□□□□ -2.1
TOP2AP11388 AF279873.1-201ENST00000523393 313 ntBASIC1.93□□□□□ -2.1
TOP2AP11388 SETP7-201ENST00000552169 453 ntBASIC1.93□□□□□ -2.1
TOP2AP11388 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC1.93□□□□□ -2.1
TOP2AP11388 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.93□□□□□ -2.1
TOP2AP11388 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TOP2AP11388 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
TOP2AP11388 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TOP2AP11388 RPL7P27-201ENST00000403775 720 ntBASIC1.92□□□□□ -2.1
TOP2AP11388 MTCYBP12-201ENST00000440559 1134 ntBASIC1.92□□□□□ -2.1
TOP2AP11388 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.92□□□□□ -2.1
TOP2AP11388 AC093852.1-201ENST00000503587 266 ntBASIC1.92□□□□□ -2.1
TOP2AP11388 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.92□□□□□ -2.1
TOP2AP11388 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.92□□□□□ -2.1
TOP2AP11388 AC245036.5-201ENST00000596330 847 ntBASIC1.92□□□□□ -2.1
TOP2AP11388 AP003122.6-201ENST00000623831 495 ntBASIC1.92□□□□□ -2.1
TOP2AP11388 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TOP2AP11388 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TOP2AP11388 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
TOP2AP11388 MFSD8-213ENST00000641134 1327 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 SNORA18.2-201ENST00000383865 132 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 RNU6-342P-201ENST00000384521 104 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.91□□□□□ -2.1
TOP2AP11388 ELOCP10-201ENST00000440624 327 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 HMGN2P21-201ENST00000447764 270 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 AC108059.3-201ENST00000456388 214 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.91□□□□□ -2.1
TOP2AP11388 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TOP2AP11388 RNU6-113P-201ENST00000516653 101 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.91□□□□□ -2.1
TOP2AP11388 ELOCP34-201ENST00000604436 327 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.91□□□□□ -2.1
TOP2AP11388 DNAJC19P6-201ENST00000401853 280 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 CYCSP33-201ENST00000414485 327 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 AL513321.1-201ENST00000441175 761 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.91□□□□□ -2.1
TOP2AP11388 UBE2L4-201ENST00000587688 464 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 RPS15AP11-201ENST00000594193 385 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.91□□□□□ -2.1
TOP2AP11388 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.91□□□□□ -2.1
TOP2AP11388 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.91□□□□□ -2.1
TOP2AP11388 AL445493.3-201ENST00000619568 477 ntBASIC1.91□□□□□ -2.1
TOP2AP11388 SNORA62.1-201ENST00000364287 154 ntBASIC1.9□□□□□ -2.11
TOP2AP11388 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.9□□□□□ -2.11
TOP2AP11388 HMGN1P14-201ENST00000412459 517 ntBASIC1.9□□□□□ -2.11
TOP2AP11388 RPL12P25-201ENST00000455592 494 ntBASIC1.9□□□□□ -2.11
TOP2AP11388 RPS29P23-201ENST00000458635 123 ntBASIC1.9□□□□□ -2.11
TOP2AP11388 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.9□□□□□ -2.11
TOP2AP11388 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.9□□□□□ -2.11
TOP2AP11388 AC135279.1-201ENST00000543493 504 ntBASIC1.9□□□□□ -2.11
TOP2AP11388 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TOP2AP11388 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TOP2AP11388 MIR598-201ENST00000384868 97 ntBASIC1.89□□□□□ -2.11
TOP2AP11388 TXNP7-201ENST00000406296 293 ntBASIC1.89□□□□□ -2.11
TOP2AP11388 SNRPFP3-201ENST00000457792 225 ntBASIC1.89□□□□□ -2.11
TOP2AP11388 AP001804.3-201ENST00000525146 880 ntBASIC1.89□□□□□ -2.11
TOP2AP11388 VN1R107P-201ENST00000601784 209 ntBASIC1.89□□□□□ -2.11
TOP2AP11388 AC097655.1-201ENST00000635075 318 ntBASIC1.89□□□□□ -2.11
TOP2AP11388 SMARCE1P4-201ENST00000523647 241 ntBASIC1.88□□□□□ -2.11
TOP2AP11388 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.88□□□□□ -2.11
TOP2AP11388 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.88□□□□□ -2.11
TOP2AP11388 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms