Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AC139713.2-215ENST00000641428 5037 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PF4V1P10720 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PF4V1P10720 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PF4V1P10720 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PF4V1P10720 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PF4V1P10720 MIR412-201ENST00000362142 91 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 RNU6-270P-201ENST00000364131 105 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.85□□□□□ -1.79
PF4V1P10720 MIR141-201ENST00000384975 95 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 MT-TL1-201ENST00000386347 75 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 RPL23AP26-201ENST00000412728 464 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 BX323014.1-201ENST00000412876 237 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 RAC1P3-201ENST00000416129 580 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 HMGN2P30-201ENST00000423237 256 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.85□□□□□ -1.79
PF4V1P10720 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PF4V1P10720 MYL8P-204ENST00000431574 518 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 AC073063.1-201ENST00000434352 607 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.85□□□□□ -1.79
PF4V1P10720 AL353572.1-201ENST00000442490 417 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 BRK1P2-201ENST00000442875 223 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 AC073264.2-201ENST00000448886 166 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 HMGB3P8-201ENST00000449709 577 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 MTND3P10-201ENST00000450967 341 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.85□□□□□ -1.79
PF4V1P10720 AC009220.1-201ENST00000451614 275 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.85□□□□□ -1.79
PF4V1P10720 RPL21P13-201ENST00000488305 481 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 OR51K1P-201ENST00000510214 950 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 OR7H2P-201ENST00000513483 306 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 AC112206.3-201ENST00000514578 389 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.85□□□□□ -1.79
PF4V1P10720 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.85□□□□□ -1.79
PF4V1P10720 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.85□□□□□ -1.79
PF4V1P10720 AC018638.8-201ENST00000588755 281 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.85□□□□□ -1.79
PF4V1P10720 AC007938.3-201ENST00000604965 623 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 Z82243.1-201ENST00000609432 473 ntBASIC3.85□□□□□ -1.79
PF4V1P10720 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PF4V1P10720 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.84□□□□□ -1.79
PF4V1P10720 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PF4V1P10720 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PF4V1P10720 ADAM5-202ENST00000399789 1942 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PF4V1P10720 RNU1-94P-201ENST00000362627 173 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 Y_RNA.72-201ENST00000362894 103 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 Y_RNA.86-201ENST00000363020 111 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 Y_RNA.100-201ENST00000363141 102 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 RNU6-522P-201ENST00000364497 107 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PF4V1P10720 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PF4V1P10720 RNU6-1077P-201ENST00000410506 102 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 POLHP1-201ENST00000411806 470 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 AC007738.1-201ENST00000413892 348 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 RPL26P27-201ENST00000414397 437 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 BX682237.1-201ENST00000415016 335 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 TBCAP2-201ENST00000416175 326 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.84□□□□□ -1.79
PF4V1P10720 RPL7P10-201ENST00000417407 739 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 AC099548.1-201ENST00000421443 426 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 PRPS1P1-201ENST00000445305 876 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 MTND4P18-201ENST00000447010 465 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 RPS29P33-201ENST00000456717 146 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.84□□□□□ -1.79
PF4V1P10720 RN7SL354P-201ENST00000469282 294 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 AC139453.3-201ENST00000493276 369 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 AC026801.1-201ENST00000497178 464 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 HIGD1AP13-201ENST00000509878 289 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.84□□□□□ -1.79
PF4V1P10720 AC025465.4-201ENST00000513422 638 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC3.84□□□□□ -1.79
PF4V1P10720 SNORA31.1-201ENST00000515993 133 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 RNU6-189P-201ENST00000516120 101 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 SNORA31.5-201ENST00000516190 133 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 NARSP2-201ENST00000518524 679 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 AC025755.1-201ENST00000521306 278 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PF4V1P10720 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.84□□□□□ -1.79
PF4V1P10720 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.84□□□□□ -1.79
PF4V1P10720 AL118558.2-201ENST00000556294 238 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.84□□□□□ -1.79
PF4V1P10720 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.84□□□□□ -1.79
PF4V1P10720 AC012119.1-201ENST00000603184 222 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.84□□□□□ -1.79
PF4V1P10720 AC092807.2-201ENST00000609367 243 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 RMST_9.1-201ENST00000619945 193 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.84□□□□□ -1.79
PF4V1P10720 U2.21-201ENST00000637295 81 ntBASIC3.84□□□□□ -1.79
PF4V1P10720 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PF4V1P10720 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.84□□□□□ -1.8
PF4V1P10720 AC121333.1-201ENST00000567488 2709 ntBASIC3.84□□□□□ -1.8
PF4V1P10720 AL022393.1-201ENST00000625142 1677 ntBASIC3.84□□□□□ -1.8
PF4V1P10720 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.84□□□□□ -1.8
PF4V1P10720 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PF4V1P10720 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
PF4V1P10720 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.84□□□□□ -1.8
PF4V1P10720 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.84□□□□□ -1.8
PF4V1P10720 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.8
PF4V1P10720 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms