Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RNU6-111P-201ENST00000517179 105 ntBASIC5.2□□□□□ -1.58
RARAP10276 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.2□□□□□ -1.58
RARAP10276 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.2□□□□□ -1.58
RARAP10276 CYCSP40-201ENST00000575927 294 ntBASIC5.2□□□□□ -1.58
RARAP10276 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.2□□□□□ -1.58
RARAP10276 MIR15A-201ENST00000607334 83 ntBASIC5.2□□□□□ -1.58
RARAP10276 AL591516.1-201ENST00000611326 274 ntBASIC5.2□□□□□ -1.58
RARAP10276 AL450472.3-201ENST00000615578 367 ntBASIC5.2□□□□□ -1.58
RARAP10276 AL591926.8-201ENST00000616876 211 ntBASIC5.2□□□□□ -1.58
RARAP10276 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.2□□□□□ -1.58
RARAP10276 AC130454.1-201ENST00000622948 401 ntBASIC5.2□□□□□ -1.58
RARAP10276 AL512643.1-201ENST00000635735 524 ntBASIC5.2□□□□□ -1.58
RARAP10276 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RARAP10276 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.2□□□□□ -1.58
RARAP10276 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RARAP10276 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RARAP10276 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RARAP10276 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RARAP10276 SALL4P2-201ENST00000423288 2910 ntBASIC5.19□□□□□ -1.58
RARAP10276 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RARAP10276 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RARAP10276 RNU4-50P-201ENST00000364361 141 ntBASIC5.19□□□□□ -1.58
RARAP10276 SNORA51.11-201ENST00000384442 131 ntBASIC5.19□□□□□ -1.58
RARAP10276 Y_RNA.555-201ENST00000384673 110 ntBASIC5.19□□□□□ -1.58
RARAP10276 SNORA66-201ENST00000384792 133 ntBASIC5.19□□□□□ -1.58
RARAP10276 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RARAP10276 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.19□□□□□ -1.58
RARAP10276 AL137014.1-201ENST00000420490 1226 ntBASIC5.19□□□□□ -1.58
RARAP10276 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.19□□□□□ -1.58
RARAP10276 AC004866.2-201ENST00000438285 481 ntBASIC5.19□□□□□ -1.58
RARAP10276 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.19□□□□□ -1.58
RARAP10276 HMGB1P35-201ENST00000503360 598 ntBASIC5.19□□□□□ -1.58
RARAP10276 SNORA31.3-201ENST00000516029 96 ntBASIC5.19□□□□□ -1.58
RARAP10276 RNU6-397P-201ENST00000516226 104 ntBASIC5.19□□□□□ -1.58
RARAP10276 RNA5SP43-201ENST00000516559 110 ntBASIC5.19□□□□□ -1.58
RARAP10276 RNU6-570P-201ENST00000517051 105 ntBASIC5.19□□□□□ -1.58
RARAP10276 RN7SKP258-201ENST00000517151 304 ntBASIC5.19□□□□□ -1.58
RARAP10276 AC087369.1-201ENST00000520775 996 ntBASIC5.19□□□□□ -1.58
RARAP10276 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.19□□□□□ -1.58
RARAP10276 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.19□□□□□ -1.58
RARAP10276 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.19□□□□□ -1.58
RARAP10276 AC022080.3-201ENST00000544433 482 ntBASIC5.19□□□□□ -1.58
RARAP10276 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.19□□□□□ -1.58
RARAP10276 RN7SL652P-201ENST00000577769 300 ntBASIC5.19□□□□□ -1.58
RARAP10276 MIR5692A1-201ENST00000580523 69 ntBASIC5.19□□□□□ -1.58
RARAP10276 HMGB2P1-201ENST00000591146 634 ntBASIC5.19□□□□□ -1.58
RARAP10276 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.19□□□□□ -1.58
RARAP10276 SUMO2P15-201ENST00000604285 278 ntBASIC5.19□□□□□ -1.58
RARAP10276 AC005344.1-201ENST00000613391 459 ntBASIC5.19□□□□□ -1.58
RARAP10276 AL159153.1-201ENST00000619688 317 ntBASIC5.19□□□□□ -1.58
RARAP10276 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RARAP10276 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
RARAP10276 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RARAP10276 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.19□□□□□ -1.58
RARAP10276 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
RARAP10276 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RARAP10276 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.18□□□□□ -1.58
RARAP10276 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
RARAP10276 RN7SKP115-201ENST00000363177 317 ntBASIC5.18□□□□□ -1.58
RARAP10276 RNA5SP455-201ENST00000365190 119 ntBASIC5.18□□□□□ -1.58
RARAP10276 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RARAP10276 Y_RNA.785-201ENST00000384290 109 ntBASIC5.18□□□□□ -1.58
RARAP10276 RNU6-790P-201ENST00000384479 105 ntBASIC5.18□□□□□ -1.58
RARAP10276 AL445529.1-201ENST00000398713 389 ntBASIC5.18□□□□□ -1.58
RARAP10276 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.18□□□□□ -1.58
RARAP10276 PIGPP3-201ENST00000425307 415 ntBASIC5.18□□□□□ -1.58
RARAP10276 AL132765.1-201ENST00000434165 553 ntBASIC5.18□□□□□ -1.58
RARAP10276 ELOCP18-201ENST00000434209 337 ntBASIC5.18□□□□□ -1.58
RARAP10276 AC090774.1-201ENST00000435925 246 ntBASIC5.18□□□□□ -1.58
RARAP10276 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.18□□□□□ -1.58
RARAP10276 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.18□□□□□ -1.58
RARAP10276 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.18□□□□□ -1.58
RARAP10276 MRPL48P1-201ENST00000445390 636 ntBASIC5.18□□□□□ -1.58
RARAP10276 RPS3AP46-201ENST00000448352 682 ntBASIC5.18□□□□□ -1.58
RARAP10276 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.18□□□□□ -1.58
RARAP10276 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.18□□□□□ -1.58
RARAP10276 AL445433.1-201ENST00000457507 257 ntBASIC5.18□□□□□ -1.58
RARAP10276 RNU7-169P-201ENST00000459456 61 ntBASIC5.18□□□□□ -1.58
RARAP10276 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.18□□□□□ -1.58
RARAP10276 AC008953.1-201ENST00000497334 318 ntBASIC5.18□□□□□ -1.58
RARAP10276 COX6B1P5-201ENST00000509843 249 ntBASIC5.18□□□□□ -1.58
RARAP10276 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.18□□□□□ -1.58
RARAP10276 RNU6-897P-201ENST00000517135 105 ntBASIC5.18□□□□□ -1.58
RARAP10276 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.18□□□□□ -1.58
RARAP10276 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.18□□□□□ -1.58
RARAP10276 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RARAP10276 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.18□□□□□ -1.58
RARAP10276 AC012433.1-201ENST00000588916 398 ntBASIC5.18□□□□□ -1.58
RARAP10276 RNF138P2-201ENST00000603490 592 ntBASIC5.18□□□□□ -1.58
RARAP10276 AC010201.1-201ENST00000605051 540 ntBASIC5.18□□□□□ -1.58
RARAP10276 AL031601.2-202ENST00000622650 282 ntBASIC5.18□□□□□ -1.58
RARAP10276 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RARAP10276 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
RARAP10276 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.18□□□□□ -1.58
RARAP10276 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RARAP10276 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RARAP10276 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RARAP10276 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.17□□□□□ -1.58
RARAP10276 AL022322.2-201ENST00000624072 20397 ntBASIC5.17□□□□□ -1.58
RARAP10276 AC009643.2-201ENST00000603543 1448 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms