Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 HMGB3P12-201ENST00000438745 556 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.47□□□□□ -1.69
SNRPA1P09661 AC018710.1-201ENST00000506509 158 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 RNU6-875P-201ENST00000516488 106 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 AC104383.1-201ENST00000530297 370 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.47□□□□□ -1.69
SNRPA1P09661 AL359212.1-201ENST00000556608 614 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 AC060771.1-201ENST00000582031 164 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 FGF7P1-201ENST00000582820 288 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.47□□□□□ -1.69
SNRPA1P09661 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.47□□□□□ -1.69
SNRPA1P09661 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.47□□□□□ -1.69
SNRPA1P09661 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.47□□□□□ -1.69
SNRPA1P09661 AL136363.1-201ENST00000605349 337 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.47□□□□□ -1.69
SNRPA1P09661 AC099654.5-201ENST00000636479 350 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 OTUD4P1-201ENST00000237841 3067 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNRPA1P09661 AL356274.2-201ENST00000624379 3752 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNRPA1P09661 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SNRPA1P09661 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SNRPA1P09661 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNRPA1P09661 NMD3P1-201ENST00000439704 1488 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNRPA1P09661 CBX3P1-201ENST00000325243 554 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 HMGN2P8-201ENST00000391458 268 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 RNU2-15P-201ENST00000410692 191 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 CYCSP10-201ENST00000417973 294 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 MTATP6P18-201ENST00000417994 673 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 ZNF90P2-204ENST00000419323 1075 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.46□□□□□ -1.7
SNRPA1P09661 FDX1P2-201ENST00000450769 375 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.46□□□□□ -1.7
SNRPA1P09661 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.46□□□□□ -1.7
SNRPA1P09661 AC087385.1-201ENST00000475062 312 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 AC055855.1-201ENST00000489563 579 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 MTCYBP18-201ENST00000501056 747 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.46□□□□□ -1.7
SNRPA1P09661 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.46□□□□□ -1.7
SNRPA1P09661 AC022616.3-201ENST00000523940 148 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 AC008489.1-201ENST00000524271 483 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNRPA1P09661 AC034105.3-201ENST00000565294 442 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.46□□□□□ -1.7
SNRPA1P09661 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.46□□□□□ -1.7
SNRPA1P09661 AL035413.2-201ENST00000604801 525 ntBASIC4.46□□□□□ -1.7
SNRPA1P09661 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.46□□□□□ -1.7
SNRPA1P09661 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SNRPA1P09661 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SNRPA1P09661 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SNRPA1P09661 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNRPA1P09661 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNRPA1P09661 RN7SKP44-201ENST00000363602 316 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 RNVU1-3-201ENST00000364313 161 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 U3.15-201ENST00000365398 212 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 RNU1-39P-201ENST00000383897 165 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 Y_RNA.481-201ENST00000384373 102 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNRPA1P09661 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.45□□□□□ -1.7
SNRPA1P09661 AC004987.3-201ENST00000413879 771 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 RPL21P111-201ENST00000418453 477 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 ELOCP4-201ENST00000420090 333 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 RPS12P5-201ENST00000423449 371 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 GTF2IP20-201ENST00000431663 360 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.45□□□□□ -1.7
SNRPA1P09661 RPS15AP9-201ENST00000439856 381 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AC092001.1-201ENST00000453012 261 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AC104308.1-201ENST00000454621 333 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.45□□□□□ -1.7
SNRPA1P09661 AC084357.1-201ENST00000473404 255 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AC021382.1-201ENST00000483523 359 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AC114786.4-201ENST00000508771 728 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.45□□□□□ -1.7
SNRPA1P09661 IGLVIV-53-201ENST00000520107 367 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 CBX3P7-201ENST00000532876 502 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.45□□□□□ -1.7
SNRPA1P09661 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.45□□□□□ -1.7
SNRPA1P09661 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.45□□□□□ -1.7
SNRPA1P09661 HIF1AP1-201ENST00000553642 175 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 MIR4719-201ENST00000585233 84 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.45□□□□□ -1.7
SNRPA1P09661 AL162413.1-201ENST00000603198 110 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AL139395.1-201ENST00000603662 160 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AC025449.1-201ENST00000603896 529 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 Z84480.1-201ENST00000605131 311 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AL160281.1-201ENST00000605307 311 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AL353621.2-201ENST00000605340 133 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.45□□□□□ -1.7
SNRPA1P09661 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.45□□□□□ -1.7
SNRPA1P09661 MIR7112-201ENST00000616126 65 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AL356585.4-201ENST00000623078 1229 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 AC112204.3-201ENST00000623822 332 ntBASIC4.45□□□□□ -1.7
SNRPA1P09661 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.45□□□□□ -1.7
SNRPA1P09661 FER-210ENST00000628534 558 ntTSL 5 BASIC4.45□□□□□ -1.7
SNRPA1P09661 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNRPA1P09661 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SNRPA1P09661 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNRPA1P09661 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNRPA1P09661 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms