Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC013562.2-201ENST00000611632 603 ntBASIC2.46□□□□□ -2.02
TPM1P09493 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.46□□□□□ -2.02
TPM1P09493 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.46□□□□□ -2.02
TPM1P09493 AL160394.1-201ENST00000624765 724 ntBASIC2.46□□□□□ -2.02
TPM1P09493 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TPM1P09493 MTND4P27-201ENST00000450813 1354 ntBASIC2.46□□□□□ -2.02
TPM1P09493 AC080128.1-201ENST00000474389 1917 ntBASIC2.46□□□□□ -2.02
TPM1P09493 MTND4P35-201ENST00000604257 1375 ntBASIC2.46□□□□□ -2.02
TPM1P09493 AC010329.5-201ENST00000623497 2174 ntBASIC2.46□□□□□ -2.02
TPM1P09493 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TPM1P09493 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
TPM1P09493 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TPM1P09493 SNORA3A-201ENST00000364113 130 ntBASIC2.45□□□□□ -2.02
TPM1P09493 RNU6-220P-201ENST00000390919 107 ntBASIC2.45□□□□□ -2.02
TPM1P09493 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TPM1P09493 RNU6-1328P-201ENST00000410938 106 ntBASIC2.45□□□□□ -2.02
TPM1P09493 NANOGP5-201ENST00000424456 877 ntBASIC2.45□□□□□ -2.02
TPM1P09493 AC007742.1-201ENST00000425789 329 ntBASIC2.45□□□□□ -2.02
TPM1P09493 AC007560.1-201ENST00000426912 237 ntBASIC2.45□□□□□ -2.02
TPM1P09493 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM1P09493 ELOCP26-201ENST00000436067 329 ntBASIC2.45□□□□□ -2.02
TPM1P09493 GXYLT1P1-201ENST00000446657 490 ntBASIC2.45□□□□□ -2.02
TPM1P09493 MTND2P24-201ENST00000453434 806 ntBASIC2.45□□□□□ -2.02
TPM1P09493 AC090515.1-201ENST00000465295 476 ntBASIC2.45□□□□□ -2.02
TPM1P09493 MRPS17P3-201ENST00000465453 385 ntBASIC2.45□□□□□ -2.02
TPM1P09493 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.45□□□□□ -2.02
TPM1P09493 RNU5F-8P-201ENST00000515941 111 ntBASIC2.45□□□□□ -2.02
TPM1P09493 RNU6-1102P-201ENST00000516149 96 ntBASIC2.45□□□□□ -2.02
TPM1P09493 SNORA70.24-201ENST00000517233 118 ntBASIC2.45□□□□□ -2.02
TPM1P09493 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.45□□□□□ -2.02
TPM1P09493 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.45□□□□□ -2.02
TPM1P09493 MTCYBP20-201ENST00000524239 1129 ntBASIC2.45□□□□□ -2.02
TPM1P09493 AC118942.1-201ENST00000529674 1035 ntBASIC2.45□□□□□ -2.02
TPM1P09493 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.45□□□□□ -2.02
TPM1P09493 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM1P09493 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.45□□□□□ -2.02
TPM1P09493 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM1P09493 AL161729.4-201ENST00000604650 476 ntBASIC2.45□□□□□ -2.02
TPM1P09493 AC004067.1-201ENST00000608733 700 ntBASIC2.45□□□□□ -2.02
TPM1P09493 AP001521.1-201ENST00000609150 300 ntBASIC2.45□□□□□ -2.02
TPM1P09493 AC008498.1-201ENST00000613012 531 ntBASIC2.45□□□□□ -2.02
TPM1P09493 MIR6817-201ENST00000615588 66 ntBASIC2.45□□□□□ -2.02
TPM1P09493 AC009159.1-201ENST00000618386 642 ntBASIC2.45□□□□□ -2.02
TPM1P09493 MIR6130-201ENST00000619419 109 ntBASIC2.45□□□□□ -2.02
TPM1P09493 AC012640.5-201ENST00000623897 319 ntBASIC2.45□□□□□ -2.02
TPM1P09493 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.45□□□□□ -2.02
TPM1P09493 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.45□□□□□ -2.02
TPM1P09493 MIR16-2-201ENST00000362117 81 ntBASIC2.44□□□□□ -2.02
TPM1P09493 RNU6-1066P-201ENST00000363573 105 ntBASIC2.44□□□□□ -2.02
TPM1P09493 SNORA67.4-201ENST00000384688 142 ntBASIC2.44□□□□□ -2.02
TPM1P09493 AP002784.2-201ENST00000397300 549 ntBASIC2.44□□□□□ -2.02
TPM1P09493 UBE2V1P15-201ENST00000407776 448 ntBASIC2.44□□□□□ -2.02
TPM1P09493 RNA5SP184-201ENST00000411071 108 ntBASIC2.44□□□□□ -2.02
TPM1P09493 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.44□□□□□ -2.02
TPM1P09493 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TPM1P09493 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.44□□□□□ -2.02
TPM1P09493 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.44□□□□□ -2.02
TPM1P09493 OR10R1P-201ENST00000441524 1141 ntBASIC2.44□□□□□ -2.02
TPM1P09493 AC097493.1-201ENST00000463958 372 ntBASIC2.44□□□□□ -2.02
TPM1P09493 RN7SL432P-201ENST00000484057 298 ntBASIC2.44□□□□□ -2.02
TPM1P09493 AC097462.2-201ENST00000504623 481 ntBASIC2.44□□□□□ -2.02
TPM1P09493 SNORA48.9-201ENST00000516419 162 ntBASIC2.44□□□□□ -2.02
TPM1P09493 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.44□□□□□ -2.02
TPM1P09493 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.44□□□□□ -2.02
TPM1P09493 VN1R92P-201ENST00000598511 928 ntBASIC2.44□□□□□ -2.02
TPM1P09493 APOOP1-201ENST00000604695 592 ntBASIC2.44□□□□□ -2.02
TPM1P09493 AC004853.1-201ENST00000604902 698 ntBASIC2.44□□□□□ -2.02
TPM1P09493 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.44□□□□□ -2.02
TPM1P09493 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.44□□□□□ -2.02
TPM1P09493 VN1R74P-201ENST00000613259 503 ntBASIC2.44□□□□□ -2.02
TPM1P09493 MIR6132-201ENST00000622083 109 ntBASIC2.44□□□□□ -2.02
TPM1P09493 AC068057.2-201ENST00000624047 895 ntBASIC2.44□□□□□ -2.02
TPM1P09493 AL109809.4-201ENST00000603520 2185 ntBASIC2.43□□□□□ -2.02
TPM1P09493 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TPM1P09493 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TPM1P09493 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TPM1P09493 RNA5SP68-201ENST00000363885 119 ntBASIC2.43□□□□□ -2.02
TPM1P09493 RNU6-741P-201ENST00000383889 107 ntBASIC2.43□□□□□ -2.02
TPM1P09493 MIR128-1-201ENST00000384921 82 ntBASIC2.43□□□□□ -2.02
TPM1P09493 AL592310.1-201ENST00000414330 671 ntBASIC2.43□□□□□ -2.02
TPM1P09493 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.43□□□□□ -2.02
TPM1P09493 AC107081.1-201ENST00000414975 361 ntBASIC2.43□□□□□ -2.02
TPM1P09493 HMGB1P49-201ENST00000418882 569 ntBASIC2.43□□□□□ -2.02
TPM1P09493 AL590233.1-201ENST00000430017 456 ntBASIC2.43□□□□□ -2.02
TPM1P09493 AL512661.1-201ENST00000434586 1253 ntBASIC2.43□□□□□ -2.02
TPM1P09493 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.43□□□□□ -2.02
TPM1P09493 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.43□□□□□ -2.02
TPM1P09493 RPS3AP14-201ENST00000483907 780 ntBASIC2.43□□□□□ -2.02
TPM1P09493 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.43□□□□□ -2.02
TPM1P09493 RNA5SP148-201ENST00000516527 94 ntBASIC2.43□□□□□ -2.02
TPM1P09493 RPL7P20-201ENST00000520308 745 ntBASIC2.43□□□□□ -2.02
TPM1P09493 AL132857.1-201ENST00000555180 708 ntBASIC2.43□□□□□ -2.02
TPM1P09493 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.43□□□□□ -2.02
TPM1P09493 RPS3AP23-202ENST00000574601 686 ntBASIC2.43□□□□□ -2.02
TPM1P09493 MIR4319-201ENST00000577285 85 ntBASIC2.43□□□□□ -2.02
TPM1P09493 LRRC37A5P-203ENST00000580181 585 ntBASIC2.43□□□□□ -2.02
TPM1P09493 MIR4448-201ENST00000584360 86 ntBASIC2.43□□□□□ -2.02
TPM1P09493 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.43□□□□□ -2.02
TPM1P09493 AC021749.1-201ENST00000604322 607 ntBASIC2.43□□□□□ -2.02
TPM1P09493 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms