Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC079395.1-201ENST00000510981 262 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AC010587.2-201ENST00000511727 448 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AC026412.2-201ENST00000512270 1075 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 RNU6-885P-201ENST00000516607 104 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 RNU6-56P-201ENST00000516986 93 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AC022690.1-201ENST00000526681 550 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC4P09017 AP001317.1-201ENST00000531194 960 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.7□□□□□ -1.98
HOXC4P09017 SETP2-201ENST00000553886 926 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AC007954.1-201ENST00000554198 494 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC4P09017 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC4P09017 MTCYBP33-201ENST00000575007 1130 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 MTCO3P13-201ENST00000577757 781 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AC011260.1-201ENST00000578420 472 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AC090616.2-202ENST00000584248 222 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXC4P09017 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC4P09017 BDH2P1-201ENST00000602288 736 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AL390838.2-201ENST00000602394 274 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.7□□□□□ -1.98
HOXC4P09017 AC012119.1-201ENST00000603184 222 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AP003973.1-201ENST00000604639 691 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AL035413.2-201ENST00000604801 525 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AC008962.1-201ENST00000605729 304 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AC007619.2-201ENST00000605743 379 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC4P09017 AL020991.1-201ENST00000612314 373 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
HOXC4P09017 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.7□□□□□ -1.98
HOXC4P09017 AL390862.1-201ENST00000635467 1469 ntBASIC2.7□□□□□ -1.98
HOXC4P09017 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC4P09017 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HOXC4P09017 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HOXC4P09017 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC4P09017 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
HOXC4P09017 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC4P09017 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXC4P09017 ELL2P3-201ENST00000457883 1602 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AL391994.1-201ENST00000254724 282 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 HMGB1P5-201ENST00000255320 642 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HOXC4P09017 RNU6-859P-201ENST00000362728 107 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 SNORA51.6-201ENST00000384151 125 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC4P09017 BTF3L4P1-201ENST00000413813 468 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC4P09017 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXC4P09017 SEPT2P1-201ENST00000419651 180 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 MTND4P20-201ENST00000424125 869 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 DPRXP1-201ENST00000426312 460 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 RPL31P54-201ENST00000429803 370 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.69□□□□□ -1.98
HOXC4P09017 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC4P09017 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.69□□□□□ -1.98
HOXC4P09017 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC4P09017 GSTA11P-201ENST00000452866 669 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AL445669.2-201ENST00000454425 421 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC4P09017 AC003982.1-202ENST00000469928 248 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AP004217.1-201ENST00000480579 346 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC4P09017 AC147055.4-201ENST00000504399 745 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AC091435.1-201ENST00000505442 584 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 KLHL2P1-201ENST00000508691 521 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 OR5BM1P-201ENST00000512021 366 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXC4P09017 RNU6-1225P-201ENST00000516336 65 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 SNORA9.3-201ENST00000516383 129 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC4P09017 ERHP1-201ENST00000523006 310 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AC024224.1-201ENST00000538284 609 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.69□□□□□ -1.98
HOXC4P09017 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.69□□□□□ -1.98
HOXC4P09017 HMGB1P6-201ENST00000569046 646 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 MIR3915-201ENST00000578518 97 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AP001330.4-201ENST00000604350 154 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AL359198.2-201ENST00000611836 194 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AC122133.1-201ENST00000613964 233 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AC008083.4-201ENST00000615076 444 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXC4P09017 AC091931.1-201ENST00000623488 728 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 AC007494.3-201ENST00000624660 743 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXC4P09017 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
HOXC4P09017 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC4P09017 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC4P09017 Z99496.1-201ENST00000469424 1477 ntBASIC2.69□□□□□ -1.98
HOXC4P09017 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 ASNSP3-201ENST00000451989 1306 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 AC090740.1-201ENST00000623193 2262 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HOXC4P09017 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC4P09017 RNU5D-1-201ENST00000363299 116 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 Y_RNA.560-201ENST00000384689 102 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 RNU6-1300P-201ENST00000391046 108 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HOXC4P09017 AC068533.2-201ENST00000411872 306 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms