Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDGFBP01127 MIR320C1-201ENST00000408566 88 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 RAP1BP1-201ENST00000412709 553 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 BMS1P22-201ENST00000414726 313 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 MTCYBP38-201ENST00000417160 1123 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AL593851.1-201ENST00000426171 157 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 MTND5P25-201ENST00000430499 799 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AC090774.1-201ENST00000435925 246 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AL008629.1-201ENST00000438615 184 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AC002381.1-201ENST00000447049 280 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.09□□□□□ -1.91
PDGFBP01127 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.09□□□□□ -1.91
PDGFBP01127 RPL37P4-201ENST00000448908 268 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.09□□□□□ -1.91
PDGFBP01127 AC093392.2-201ENST00000450682 337 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.09□□□□□ -1.91
PDGFBP01127 RNU7-125P-201ENST00000458760 62 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 snoU13.26-201ENST00000459452 105 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 RPL23AP67-201ENST00000465341 474 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 RPS20P22-201ENST00000473700 357 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AC117440.1-201ENST00000474107 571 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AC104563.1-201ENST00000476147 376 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 HMGB1P36-201ENST00000487709 576 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.09□□□□□ -1.91
PDGFBP01127 RNU4-29P-201ENST00000515943 174 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AC107934.2-201ENST00000518653 310 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.09□□□□□ -1.91
PDGFBP01127 OR5G4P-201ENST00000525251 760 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AC239860.2-201ENST00000525886 270 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.09□□□□□ -1.91
PDGFBP01127 AP000867.2-201ENST00000532468 320 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 OR6C7P-201ENST00000547875 934 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.09□□□□□ -1.91
PDGFBP01127 AC009094.1-201ENST00000564443 426 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.09□□□□□ -1.91
PDGFBP01127 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.09□□□□□ -1.91
PDGFBP01127 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.09□□□□□ -1.91
PDGFBP01127 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.09□□□□□ -1.91
PDGFBP01127 AL353997.4-201ENST00000586196 166 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 NUTF2P8-201ENST00000604593 363 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AL133507.1-201ENST00000605269 557 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AL158211.4-201ENST00000606988 584 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AC103710.4-201ENST00000609301 899 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 AC008147.4-201ENST00000617570 1204 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 MIR7153-201ENST00000637758 57 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
PDGFBP01127 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
PDGFBP01127 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
PDGFBP01127 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PDGFBP01127 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
PDGFBP01127 FAM35CP-201ENST00000554755 2470 ntBASIC3.09□□□□□ -1.92
PDGFBP01127 AC009487.2-201ENST00000420969 6821 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDGFBP01127 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDGFBP01127 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDGFBP01127 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PDGFBP01127 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PDGFBP01127 TPMTP3-201ENST00000411928 735 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.08□□□□□ -1.92
PDGFBP01127 ATG3P1-201ENST00000419507 911 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 RPS15AP6-201ENST00000420703 385 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AL645937.1-202ENST00000421799 937 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.08□□□□□ -1.92
PDGFBP01127 NDUFB4P7-201ENST00000423198 363 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AC019097.1-201ENST00000424783 735 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 MTND1P20-201ENST00000430341 950 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AC092573.2-201ENST00000434546 243 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.08□□□□□ -1.92
PDGFBP01127 LSM1P1-201ENST00000438629 273 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AC009237.8-201ENST00000445492 379 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 RPS4XP2-201ENST00000458402 793 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 RNU6-420P-201ENST00000458780 107 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 SNORD121B-201ENST00000458838 81 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 SNORD109B-201ENST00000458961 67 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 SNORD109A-201ENST00000459128 67 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AC010468.1-201ENST00000461022 817 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AC091179.1-201ENST00000461606 579 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AC072039.1-201ENST00000477611 581 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 LINC00888-204ENST00000487386 421 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.08□□□□□ -1.92
PDGFBP01127 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PDGFBP01127 RNU6-798P-201ENST00000516912 103 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AC105185.1-201ENST00000518705 535 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDGFBP01127 AC011602.1-201ENST00000546484 331 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.08□□□□□ -1.92
PDGFBP01127 AL121576.1-201ENST00000556055 276 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.08□□□□□ -1.92
PDGFBP01127 MIR4999-201ENST00000585029 91 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 NIFKP6-201ENST00000598115 845 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AC112220.3-201ENST00000605502 502 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AC007671.2-201ENST00000637344 619 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDGFBP01127 DDX43P2-201ENST00000604753 1354 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 AC012321.1-201ENST00000561622 1588 ntBASIC3.08□□□□□ -1.92
PDGFBP01127 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PDGFBP01127 AP003122.5-201ENST00000527668 3766 ntBASIC3.07□□□□□ -1.92
PDGFBP01127 AC099654.7-201ENST00000635788 2127 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms