Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RNU6-1322P-201ENST00000364309 107 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 RNU6-343P-201ENST00000364709 104 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TOP3BO95985 MIR128-1-201ENST00000384921 82 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 FAT1P1-201ENST00000406588 507 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.92□□□□□ -1.78
TOP3BO95985 GTF2IP20-201ENST00000431663 360 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 AL159987.2-201ENST00000432754 307 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 HSPD1P21-201ENST00000436541 245 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 AC083863.1-201ENST00000438811 231 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.92□□□□□ -1.78
TOP3BO95985 HMGB1P15-201ENST00000453854 435 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.92□□□□□ -1.78
TOP3BO95985 RPL36AP51-201ENST00000487216 318 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.92□□□□□ -1.78
TOP3BO95985 AP001025.2-201ENST00000490908 477 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 AC023194.1-201ENST00000493084 308 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.92□□□□□ -1.78
TOP3BO95985 AC005798.1-201ENST00000513715 387 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 RN7SKP57-201ENST00000517248 293 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.92□□□□□ -1.78
TOP3BO95985 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.92□□□□□ -1.78
TOP3BO95985 AC090136.1-201ENST00000520009 240 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.92□□□□□ -1.78
TOP3BO95985 SUB1P2-201ENST00000556401 297 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 MIR4795-201ENST00000584182 89 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.92□□□□□ -1.78
TOP3BO95985 RMST_3.1-201ENST00000611651 109 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TOP3BO95985 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
TOP3BO95985 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TOP3BO95985 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TOP3BO95985 AC008725.1-201ENST00000605123 2263 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.92□□□□□ -1.78
TOP3BO95985 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TOP3BO95985 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TOP3BO95985 AL161781.1-201ENST00000354277 403 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 Y_RNA.72-201ENST00000362894 103 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 RNU1-18P-201ENST00000363062 164 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 RNU6-744P-201ENST00000365557 107 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.91□□□□□ -1.78
TOP3BO95985 RNU1-39P-201ENST00000383897 165 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 RNU6-730P-201ENST00000383954 104 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 RNU6-1316P-201ENST00000384242 108 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 Y_RNA.548-201ENST00000384656 105 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.91□□□□□ -1.78
TOP3BO95985 MIR1251-201ENST00000408552 70 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 AC127391.1-201ENST00000411737 98 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.91□□□□□ -1.78
TOP3BO95985 PSMA2P3-201ENST00000429685 675 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.91□□□□□ -1.78
TOP3BO95985 HMGB1P37-201ENST00000439613 609 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 RANP8-201ENST00000444720 713 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.91□□□□□ -1.78
TOP3BO95985 NUP58P1-201ENST00000502546 1738 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TOP3BO95985 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.91□□□□□ -1.78
TOP3BO95985 RN7SKP83-201ENST00000516512 178 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 AC022616.6-201ENST00000520479 119 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.91□□□□□ -1.78
TOP3BO95985 AC007991.1-201ENST00000522680 631 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.91□□□□□ -1.78
TOP3BO95985 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.91□□□□□ -1.78
TOP3BO95985 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.91□□□□□ -1.78
TOP3BO95985 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.91□□□□□ -1.78
TOP3BO95985 AL157700.1-201ENST00000561973 1432 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 MTCO3P13-201ENST00000577757 781 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 AC087499.8-201ENST00000578406 226 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 AL353997.4-201ENST00000586196 166 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 AC005498.1-201ENST00000592125 465 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 AL136363.1-201ENST00000605349 337 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.91□□□□□ -1.78
TOP3BO95985 PART1_1.1-201ENST00000611761 217 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.91□□□□□ -1.78
TOP3BO95985 AL133173.2-201ENST00000614270 90 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.91□□□□□ -1.78
TOP3BO95985 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.91□□□□□ -1.78
TOP3BO95985 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.91□□□□□ -1.78
TOP3BO95985 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 NCAPGP1-201ENST00000505112 1814 ntBASIC3.91□□□□□ -1.78
TOP3BO95985 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TOP3BO95985 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TOP3BO95985 ZNF734P-201ENST00000419494 1534 ntBASIC3.9□□□□□ -1.78
TOP3BO95985 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TOP3BO95985 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.9□□□□□ -1.78
TOP3BO95985 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
TOP3BO95985 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
TOP3BO95985 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
TOP3BO95985 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TOP3BO95985 RNU6-451P-201ENST00000362921 107 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 Y_RNA.460-201ENST00000384255 102 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 HMGN2P8-201ENST00000391458 268 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 RNA5SP118-201ENST00000410385 109 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 RNU2-8P-201ENST00000410727 190 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 USP9YP20-201ENST00000419224 558 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.9□□□□□ -1.79
TOP3BO95985 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.9□□□□□ -1.79
TOP3BO95985 ATP5HP2-201ENST00000433885 485 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.9□□□□□ -1.79
TOP3BO95985 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms