Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.34□□□□□ -2.2
ABCA1O95477 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.34□□□□□ -2.2
ABCA1O95477 AC008885.2-201ENST00000509506 930 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 FABP5P6-201ENST00000510588 409 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 AC016065.2-201ENST00000514530 444 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 RN7SKP40-201ENST00000517211 242 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 IGLV3-17-201ENST00000519099 244 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.34□□□□□ -2.2
ABCA1O95477 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.34□□□□□ -2.2
ABCA1O95477 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.34□□□□□ -2.2
ABCA1O95477 MED28P6-201ENST00000558776 231 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 AL009028.1-201ENST00000604895 802 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
ABCA1O95477 AL590410.1-201ENST00000617925 333 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 FO624990.1-201ENST00000636373 85 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 AC087359.1-201ENST00000508335 1740 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 AC233981.2-201ENST00000611524 1614 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 AC009487.4-201ENST00000624969 3585 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 MIR627-201ENST00000384979 97 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 MIR517C-201ENST00000385103 95 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
ABCA1O95477 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.33□□□□□ -2.2
ABCA1O95477 YWHAZP8-201ENST00000436935 731 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 AL451074.3-201ENST00000437709 472 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 AC009474.2-201ENST00000451383 136 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 HMGN1P8-201ENST00000463578 288 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 RNU4-18P-201ENST00000516751 149 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 RNA5SP102-201ENST00000516865 106 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.33□□□□□ -2.2
ABCA1O95477 NBEAP1-201ENST00000554452 979 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.33□□□□□ -2.2
ABCA1O95477 AC103987.3-201ENST00000582071 292 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.33□□□□□ -2.2
ABCA1O95477 AC025594.3-201ENST00000613068 790 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 AL157834.3-201ENST00000615543 103 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 AC104307.1-201ENST00000616142 196 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.33□□□□□ -2.2
ABCA1O95477 RNU6-461P-201ENST00000364195 107 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 Y_RNA.327-201ENST00000365201 102 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 RNU6-821P-201ENST00000390995 107 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.33□□□□□ -2.2
ABCA1O95477 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.33□□□□□ -2.2
ABCA1O95477 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 RABEPKP1-201ENST00000440529 1026 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 RNF2P1-201ENST00000442955 1010 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 AC009296.1-201ENST00000443146 155 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 UBBP3-201ENST00000445497 241 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 AL139109.1-201ENST00000455491 297 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 AL031183.1-201ENST00000457667 207 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 MRPL42P6-201ENST00000486397 371 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.33□□□□□ -2.2
ABCA1O95477 AC008526.1-201ENST00000509149 338 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 RNA5SP82-201ENST00000516707 92 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 MTCO1P47-201ENST00000523889 1271 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.33□□□□□ -2.2
ABCA1O95477 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.33□□□□□ -2.2
ABCA1O95477 AC245036.5-201ENST00000596330 847 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 AL355812.1-201ENST00000603215 216 ntBASIC1.33□□□□□ -2.2
ABCA1O95477 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
ABCA1O95477 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
ABCA1O95477 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
ABCA1O95477 RNU6-342P-201ENST00000384521 104 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.32□□□□□ -2.2
ABCA1O95477 RN7SKP101-201ENST00000411376 320 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 HMGB3P31-201ENST00000413333 595 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.32□□□□□ -2.2
ABCA1O95477 AC096632.1-201ENST00000427395 310 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 RPL21P39-201ENST00000463605 483 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AC011979.1-201ENST00000472300 483 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AC087879.1-201ENST00000474343 374 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 RPL21P93-201ENST00000480465 489 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AC069528.1-202ENST00000482888 637 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AC233702.1-201ENST00000482905 502 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AC093591.1-201ENST00000491435 481 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AC109464.2-201ENST00000510242 943 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.32□□□□□ -2.2
ABCA1O95477 AC007115.1-201ENST00000546853 234 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AC067805.1-201ENST00000559344 470 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AC015720.1-201ENST00000565251 277 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AL078603.1-201ENST00000603824 313 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AC095038.3-201ENST00000634439 195 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
ABCA1O95477 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
ABCA1O95477 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
ABCA1O95477 MCTS2P-201ENST00000394552 546 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AL358075.3-201ENST00000426289 226 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.32□□□□□ -2.2
ABCA1O95477 AC108734.3-201ENST00000481241 1165 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.32□□□□□ -2.2
ABCA1O95477 AC079203.1-201ENST00000487972 404 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.32□□□□□ -2.2
ABCA1O95477 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.32□□□□□ -2.2
ABCA1O95477 AC093767.1-201ENST00000504523 156 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.32□□□□□ -2.2
ABCA1O95477 AC019176.1-201ENST00000518519 225 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.32□□□□□ -2.2
ABCA1O95477 AC023158.1-201ENST00000561632 1025 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.32□□□□□ -2.2
ABCA1O95477 MYL12BP1-201ENST00000569826 507 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms