Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.75□□□□□ -2.13
LTN1O94822 AL031601.2-202ENST00000622650 282 ntBASIC1.75□□□□□ -2.13
LTN1O94822 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LTN1O94822 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
LTN1O94822 DEFB109C-201ENST00000382575 264 ntBASIC1.75□□□□□ -2.13
LTN1O94822 DEFB109B-201ENST00000382656 264 ntBASIC1.75□□□□□ -2.13
LTN1O94822 AL591034.1-201ENST00000407447 340 ntBASIC1.75□□□□□ -2.13
LTN1O94822 RPL7P18-201ENST00000478965 734 ntBASIC1.75□□□□□ -2.13
LTN1O94822 AC019176.1-201ENST00000518519 225 ntBASIC1.75□□□□□ -2.13
LTN1O94822 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.75□□□□□ -2.13
LTN1O94822 AP005435.4-201ENST00000529514 284 ntBASIC1.75□□□□□ -2.13
LTN1O94822 ANP32BP3-201ENST00000559213 706 ntBASIC1.75□□□□□ -2.13
LTN1O94822 AL731537.2-201ENST00000561565 951 ntBASIC1.75□□□□□ -2.13
LTN1O94822 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.75□□□□□ -2.13
LTN1O94822 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
LTN1O94822 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LTN1O94822 AL030996.1-201ENST00000411430 235 ntBASIC1.74□□□□□ -2.13
LTN1O94822 AC241520.1-201ENST00000422654 1099 ntBASIC1.74□□□□□ -2.13
LTN1O94822 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.74□□□□□ -2.13
LTN1O94822 AC010301.1-201ENST00000473936 355 ntBASIC1.74□□□□□ -2.13
LTN1O94822 AC107398.1-201ENST00000486904 505 ntBASIC1.74□□□□□ -2.13
LTN1O94822 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LTN1O94822 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.74□□□□□ -2.13
LTN1O94822 KLRA1P-201ENST00000503499 986 ntBASIC1.74□□□□□ -2.13
LTN1O94822 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
LTN1O94822 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.74□□□□□ -2.13
LTN1O94822 AC090821.2-201ENST00000523552 176 ntBASIC1.74□□□□□ -2.13
LTN1O94822 OSBPL9P3-201ENST00000534523 595 ntBASIC1.74□□□□□ -2.13
LTN1O94822 AC068338.1-201ENST00000565567 176 ntBASIC1.74□□□□□ -2.13
LTN1O94822 MIR6078-201ENST00000611069 100 ntBASIC1.74□□□□□ -2.13
LTN1O94822 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.73□□□□□ -2.13
LTN1O94822 RNU6-50P-201ENST00000362356 103 ntBASIC1.73□□□□□ -2.13
LTN1O94822 RNY1-201ENST00000364228 113 ntBASIC1.73□□□□□ -2.13
LTN1O94822 UBE2V1P13-201ENST00000436983 439 ntBASIC1.73□□□□□ -2.13
LTN1O94822 KATNBL1P3-201ENST00000443475 909 ntBASIC1.73□□□□□ -2.13
LTN1O94822 AC092902.1-201ENST00000486999 259 ntBASIC1.73□□□□□ -2.13
LTN1O94822 RPL30P11-201ENST00000495304 339 ntBASIC1.73□□□□□ -2.13
LTN1O94822 AC025755.1-201ENST00000521306 278 ntBASIC1.73□□□□□ -2.13
LTN1O94822 AC109446.2-201ENST00000567872 497 ntBASIC1.73□□□□□ -2.13
LTN1O94822 GLUD1P4-201ENST00000590914 418 ntBASIC1.73□□□□□ -2.13
LTN1O94822 AC245128.3-201ENST00000594721 748 ntBASIC1.73□□□□□ -2.13
LTN1O94822 AP001350.1-201ENST00000601906 1524 ntBASIC1.73□□□□□ -2.13
LTN1O94822 AC121333.1-201ENST00000567488 2709 ntBASIC1.73□□□□□ -2.13
LTN1O94822 AL359851.1-201ENST00000569460 4997 ntBASIC1.73□□□□□ -2.13
LTN1O94822 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LTN1O94822 RNU1-93P-201ENST00000364704 169 ntBASIC1.72□□□□□ -2.13
LTN1O94822 MIR17-201ENST00000385012 84 ntBASIC1.72□□□□□ -2.13
LTN1O94822 AL445669.1-201ENST00000426743 755 ntBASIC1.72□□□□□ -2.13
LTN1O94822 AL590233.1-201ENST00000430017 456 ntBASIC1.72□□□□□ -2.13
LTN1O94822 RPS27P21-201ENST00000486977 252 ntBASIC1.72□□□□□ -2.13
LTN1O94822 MIR514B-201ENST00000516774 80 ntBASIC1.72□□□□□ -2.13
LTN1O94822 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.72□□□□□ -2.13
LTN1O94822 MIR151B-201ENST00000584249 96 ntBASIC1.72□□□□□ -2.13
LTN1O94822 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.72□□□□□ -2.13
LTN1O94822 AC008739.2-201ENST00000597006 317 ntBASIC1.72□□□□□ -2.13
LTN1O94822 AC012640.5-201ENST00000623897 319 ntBASIC1.72□□□□□ -2.13
LTN1O94822 MKKS-204ENST00000639674 192 ntBASIC1.72□□□□□ -2.13
LTN1O94822 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
LTN1O94822 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LTN1O94822 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LTN1O94822 HMGB1P5-201ENST00000255320 642 ntBASIC1.72□□□□□ -2.13
LTN1O94822 RNU1-22P-201ENST00000363334 158 ntBASIC1.72□□□□□ -2.13
LTN1O94822 RNU6-461P-201ENST00000364195 107 ntBASIC1.72□□□□□ -2.13
LTN1O94822 RNU1-52P-201ENST00000384190 164 ntBASIC1.72□□□□□ -2.13
LTN1O94822 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.72□□□□□ -2.13
LTN1O94822 RPS6P15-201ENST00000431996 751 ntBASIC1.72□□□□□ -2.13
LTN1O94822 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.72□□□□□ -2.13
LTN1O94822 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.72□□□□□ -2.13
LTN1O94822 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.72□□□□□ -2.13
LTN1O94822 MTND3P24-201ENST00000506306 329 ntBASIC1.72□□□□□ -2.13
LTN1O94822 AC114322.1-201ENST00000506771 926 ntBASIC1.72□□□□□ -2.13
LTN1O94822 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.72□□□□□ -2.13
LTN1O94822 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LTN1O94822 MTCO1P40-201ENST00000574371 625 ntBASIC1.72□□□□□ -2.13
LTN1O94822 OR10AB1P-201ENST00000609613 938 ntBASIC1.72□□□□□ -2.13
LTN1O94822 MIR7973-1-201ENST00000614683 76 ntBASIC1.72□□□□□ -2.13
LTN1O94822 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.72□□□□□ -2.13
LTN1O94822 RNU6-1080P-201ENST00000383982 107 ntBASIC1.71□□□□□ -2.14
LTN1O94822 SNORA40.6-201ENST00000391153 128 ntBASIC1.71□□□□□ -2.14
LTN1O94822 AC234775.1-201ENST00000454247 670 ntBASIC1.71□□□□□ -2.14
LTN1O94822 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.71□□□□□ -2.14
LTN1O94822 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LTN1O94822 RN7SKP49-201ENST00000516675 260 ntBASIC1.71□□□□□ -2.14
LTN1O94822 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC1.71□□□□□ -2.14
LTN1O94822 HMGB1P46-201ENST00000520062 610 ntBASIC1.71□□□□□ -2.14
LTN1O94822 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.71□□□□□ -2.14
LTN1O94822 AL137100.2-201ENST00000555786 315 ntBASIC1.71□□□□□ -2.14
LTN1O94822 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.71□□□□□ -2.14
LTN1O94822 AL356118.1-201ENST00000635272 1078 ntBASIC1.71□□□□□ -2.14
LTN1O94822 MIR3199-2-201ENST00000636243 86 ntBASIC1.71□□□□□ -2.14
LTN1O94822 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LTN1O94822 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LTN1O94822 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.7□□□□□ -2.14
LTN1O94822 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.7□□□□□ -2.14
LTN1O94822 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.7□□□□□ -2.14
LTN1O94822 MTCO3P35-201ENST00000485582 781 ntBASIC1.7□□□□□ -2.14
LTN1O94822 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.7□□□□□ -2.14
LTN1O94822 AP002748.2-201ENST00000528671 348 ntBASIC1.7□□□□□ -2.14
LTN1O94822 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.7□□□□□ -2.14
LTN1O94822 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms