Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.4□□□□□ -1.87
GPC4O75487 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.4□□□□□ -1.87
GPC4O75487 AC004024.1-201ENST00000549244 247 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AL391156.1-201ENST00000554965 554 ntBASIC3.4□□□□□ -1.87
GPC4O75487 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC4O75487 OR4H12P-201ENST00000556269 907 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.4□□□□□ -1.87
GPC4O75487 MIR4429-201ENST00000580105 73 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AF038458.1-201ENST00000588406 262 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AC067852.3-201ENST00000589177 561 ntBASIC3.4□□□□□ -1.87
GPC4O75487 CKS1BP3-201ENST00000600888 237 ntBASIC3.4□□□□□ -1.87
GPC4O75487 KC877982.1-201ENST00000602313 470 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AL359999.1-201ENST00000604513 294 ntBASIC3.4□□□□□ -1.87
GPC4O75487 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.4□□□□□ -1.87
GPC4O75487 AC091304.9-201ENST00000612091 226 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AC090970.3-201ENST00000612566 866 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AC008250.2-201ENST00000615261 205 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AC009509.4-201ENST00000619202 509 ntBASIC3.4□□□□□ -1.87
GPC4O75487 PLCE1P1-201ENST00000622094 305 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AL357559.1-201ENST00000622228 274 ntBASIC3.4□□□□□ -1.87
GPC4O75487 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
GPC4O75487 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.4□□□□□ -1.87
GPC4O75487 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.4□□□□□ -1.87
GPC4O75487 AL513302.2-201ENST00000562313 1842 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AC118273.1-201ENST00000525324 3006 ntBASIC3.39□□□□□ -1.87
GPC4O75487 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GPC4O75487 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GPC4O75487 AC092104.1-201ENST00000497346 1441 ntBASIC3.39□□□□□ -1.87
GPC4O75487 AL356274.2-201ENST00000624379 3752 ntBASIC3.39□□□□□ -1.87
GPC4O75487 OR4G2P-202ENST00000641004 1759 ntBASIC3.39□□□□□ -1.87
GPC4O75487 RNU6-223P-201ENST00000362830 107 ntBASIC3.39□□□□□ -1.87
GPC4O75487 U8.3-201ENST00000363321 132 ntBASIC3.39□□□□□ -1.87
GPC4O75487 SNORA75-201ENST00000384158 137 ntBASIC3.39□□□□□ -1.87
GPC4O75487 MIR23B-201ENST00000384832 97 ntBASIC3.39□□□□□ -1.87
GPC4O75487 MIR218-2-201ENST00000385006 110 ntBASIC3.39□□□□□ -1.87
GPC4O75487 SNORD17-201ENST00000390930 237 ntBASIC3.39□□□□□ -1.87
GPC4O75487 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC4O75487 TXNP7-201ENST00000406296 293 ntBASIC3.39□□□□□ -1.87
GPC4O75487 RNU6-248P-201ENST00000410720 107 ntBASIC3.39□□□□□ -1.87
GPC4O75487 RPL21P24-201ENST00000413752 448 ntBASIC3.39□□□□□ -1.87
GPC4O75487 SPA17P1-201ENST00000416656 452 ntBASIC3.39□□□□□ -1.87
GPC4O75487 MTCO2P34-201ENST00000421994 607 ntBASIC3.39□□□□□ -1.87
GPC4O75487 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC4O75487 AC008850.1-201ENST00000427546 362 ntBASIC3.39□□□□□ -1.87
GPC4O75487 VN1R108P-201ENST00000431580 830 ntBASIC3.39□□□□□ -1.87
GPC4O75487 AL353706.1-201ENST00000436728 494 ntBASIC3.39□□□□□ -1.87
GPC4O75487 MTCO3P45-201ENST00000443036 613 ntBASIC3.39□□□□□ -1.87
GPC4O75487 KATNBL1P3-201ENST00000443475 909 ntBASIC3.39□□□□□ -1.87
GPC4O75487 MTATP6P30-201ENST00000443540 664 ntBASIC3.39□□□□□ -1.87
GPC4O75487 PDSS1P2-201ENST00000449397 678 ntBASIC3.39□□□□□ -1.87
GPC4O75487 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.39□□□□□ -1.87
GPC4O75487 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC4O75487 HMGN1P18-201ENST00000457642 277 ntBASIC3.39□□□□□ -1.87
GPC4O75487 RPS4XP2-201ENST00000458402 793 ntBASIC3.39□□□□□ -1.87
GPC4O75487 AC008481.1-201ENST00000463278 396 ntBASIC3.39□□□□□ -1.87
GPC4O75487 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GPC4O75487 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.39□□□□□ -1.87
GPC4O75487 NDUFB4P2-201ENST00000509515 391 ntBASIC3.39□□□□□ -1.87
GPC4O75487 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC4O75487 MIR2276-201ENST00000516886 89 ntBASIC3.39□□□□□ -1.87
GPC4O75487 RNA5SP380-201ENST00000517190 98 ntBASIC3.39□□□□□ -1.87
GPC4O75487 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC4O75487 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC4O75487 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC4O75487 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC4O75487 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC4O75487 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.39□□□□□ -1.87
GPC4O75487 AL606834.2-201ENST00000602954 668 ntBASIC3.39□□□□□ -1.87
GPC4O75487 AP000860.1-201ENST00000605250 559 ntBASIC3.39□□□□□ -1.87
GPC4O75487 AP002826.1-201ENST00000608835 315 ntBASIC3.39□□□□□ -1.87
GPC4O75487 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GPC4O75487 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC4O75487 AC010678.1-201ENST00000614118 713 ntBASIC3.39□□□□□ -1.87
GPC4O75487 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC4O75487 AL392088.2-201ENST00000637607 285 ntBASIC3.39□□□□□ -1.87
GPC4O75487 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
GPC4O75487 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GPC4O75487 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
GPC4O75487 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC4O75487 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
GPC4O75487 AC032011.1-201ENST00000611703 1549 ntBASIC3.39□□□□□ -1.87
GPC4O75487 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GPC4O75487 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.38□□□□□ -1.87
GPC4O75487 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.38□□□□□ -1.87
GPC4O75487 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.38□□□□□ -1.87
GPC4O75487 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.38□□□□□ -1.87
GPC4O75487 AL049781.1-201ENST00000623195 3585 ntBASIC3.38□□□□□ -1.87
GPC4O75487 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GPC4O75487 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GPC4O75487 RNU6-348P-201ENST00000384386 107 ntBASIC3.38□□□□□ -1.87
GPC4O75487 MIR514A1-201ENST00000385133 98 ntBASIC3.38□□□□□ -1.87
GPC4O75487 RNU6-278P-201ENST00000390945 109 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AP000567.1-201ENST00000406413 156 ntBASIC3.38□□□□□ -1.87
GPC4O75487 RPS29P4-201ENST00000414733 161 ntBASIC3.38□□□□□ -1.87
GPC4O75487 HMGB3P23-201ENST00000414981 585 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.38□□□□□ -1.87
GPC4O75487 RPL21P32-201ENST00000419877 477 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AC006366.1-201ENST00000422002 759 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AC007283.2-201ENST00000424739 197 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AC019097.1-201ENST00000424783 735 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms