Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 GTF2IP12-201ENST00000456547 356 ntBASIC0.58□□□□□ -2.32
USH2AO75445 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
USH2AO75445 AC006270.3-201ENST00000605967 1036 ntBASIC0.58□□□□□ -2.32
USH2AO75445 AL121594.5-201ENST00000631724 573 ntBASIC0.58□□□□□ -2.32
USH2AO75445 RNU6-222P-201ENST00000362438 107 ntBASIC0.58□□□□□ -2.32
USH2AO75445 RNU6-1305P-201ENST00000364353 104 ntBASIC0.58□□□□□ -2.32
USH2AO75445 BTBD10P2-201ENST00000404779 676 ntBASIC0.58□□□□□ -2.32
USH2AO75445 MIR5589-201ENST00000579442 60 ntBASIC0.58□□□□□ -2.32
USH2AO75445 AL161912.3-201ENST00000605404 628 ntBASIC0.58□□□□□ -2.32
USH2AO75445 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
USH2AO75445 ZNF37BP-203ENST00000452306 1352 ntBASIC0.57□□□□□ -2.32
USH2AO75445 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
USH2AO75445 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC0.57□□□□□ -2.32
USH2AO75445 AC009961.3-201ENST00000449832 765 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC0.57□□□□□ -2.32
USH2AO75445 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.57□□□□□ -2.32
USH2AO75445 SNORD121B-201ENST00000458838 81 ntBASIC0.57□□□□□ -2.32
USH2AO75445 snoU13.19-201ENST00000459148 104 ntBASIC0.57□□□□□ -2.32
USH2AO75445 MIR4448-201ENST00000584360 86 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.57□□□□□ -2.32
USH2AO75445 AC241377.1-201ENST00000619797 406 ntBASIC0.57□□□□□ -2.32
USH2AO75445 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.57□□□□□ -2.32
USH2AO75445 RNA5SP239-201ENST00000410218 129 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.57□□□□□ -2.32
USH2AO75445 AC234064.1-201ENST00000436312 247 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.57□□□□□ -2.32
USH2AO75445 AC027673.1-201ENST00000456245 405 ntBASIC0.57□□□□□ -2.32
USH2AO75445 GTF2IP9-201ENST00000502460 301 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AP000560.1-201ENST00000624150 1937 ntBASIC0.57□□□□□ -2.32
USH2AO75445 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
USH2AO75445 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
USH2AO75445 PTGES3P5-201ENST00000455109 434 ntBASIC0.57□□□□□ -2.32
USH2AO75445 RPS26P24-201ENST00000497656 331 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AC006499.2-201ENST00000513470 337 ntBASIC0.57□□□□□ -2.32
USH2AO75445 MIR4295-201ENST00000585286 85 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AC073413.2-201ENST00000604332 360 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AP000254.1-201ENST00000609934 520 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AC004808.1-201ENST00000627671 721 ntBASIC0.57□□□□□ -2.32
USH2AO75445 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.57□□□□□ -2.32
USH2AO75445 ZNF271P-202ENST00000465539 1970 ntBASIC0.57□□□□□ -2.32
USH2AO75445 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
USH2AO75445 MIRLET7G-201ENST00000362280 84 ntBASIC0.57□□□□□ -2.32
USH2AO75445 Z86062.1-201ENST00000406773 777 ntBASIC0.57□□□□□ -2.32
USH2AO75445 RNA5SP181-201ENST00000410246 98 ntBASIC0.57□□□□□ -2.32
USH2AO75445 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC0.57□□□□□ -2.32
USH2AO75445 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC0.57□□□□□ -2.32
USH2AO75445 AC006270.2-201ENST00000578523 652 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC0.57□□□□□ -2.32
USH2AO75445 AC146944.4-201ENST00000602697 718 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AC211469.2-201ENST00000605461 205 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AC107294.3-201ENST00000609211 526 ntBASIC0.57□□□□□ -2.32
USH2AO75445 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC0.57□□□□□ -2.32
USH2AO75445 MIR924-201ENST00000638017 53 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AC103710.2-202ENST00000641454 2853 ntBASIC0.57□□□□□ -2.32
USH2AO75445 AC011477.1-204ENST00000623416 1325 ntBASIC0.57□□□□□ -2.32
USH2AO75445 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
USH2AO75445 SNORA9.1-201ENST00000362412 131 ntBASIC0.56□□□□□ -2.32
USH2AO75445 SNORD114-23-201ENST00000363536 72 ntBASIC0.56□□□□□ -2.32
USH2AO75445 RNU6-173P-201ENST00000364215 104 ntBASIC0.56□□□□□ -2.32
USH2AO75445 SNRPGP12-201ENST00000449481 213 ntBASIC0.56□□□□□ -2.32
USH2AO75445 CYCSP23-201ENST00000519781 313 ntBASIC0.56□□□□□ -2.32
USH2AO75445 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC0.56□□□□□ -2.32
USH2AO75445 DEFB108E-201ENST00000524692 240 ntBASIC0.56□□□□□ -2.32
USH2AO75445 AC074029.2-201ENST00000551045 634 ntBASIC0.56□□□□□ -2.32
USH2AO75445 AC007375.1-201ENST00000554513 578 ntBASIC0.56□□□□□ -2.32
USH2AO75445 MTCO1P40-201ENST00000574371 625 ntBASIC0.56□□□□□ -2.32
USH2AO75445 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.56□□□□□ -2.32
USH2AO75445 SEPT7P9-203ENST00000604116 343 ntBASIC0.56□□□□□ -2.32
USH2AO75445 AC009229.3-201ENST00000608056 282 ntBASIC0.56□□□□□ -2.32
USH2AO75445 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC0.56□□□□□ -2.32
USH2AO75445 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.56□□□□□ -2.32
USH2AO75445 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
USH2AO75445 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
USH2AO75445 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC0.56□□□□□ -2.32
USH2AO75445 AP003117.1-201ENST00000602771 554 ntBASIC0.56□□□□□ -2.32
USH2AO75445 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC0.56□□□□□ -2.32
USH2AO75445 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.56□□□□□ -2.32
USH2AO75445 SNORA62.2-201ENST00000364672 152 ntBASIC0.56□□□□□ -2.32
USH2AO75445 U8.9-201ENST00000365667 134 ntBASIC0.56□□□□□ -2.32
USH2AO75445 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
USH2AO75445 MIR532-201ENST00000385025 91 ntBASIC0.56□□□□□ -2.32
USH2AO75445 MIR758-201ENST00000390227 88 ntBASIC0.56□□□□□ -2.32
USH2AO75445 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC0.56□□□□□ -2.32
USH2AO75445 WARS2P1-201ENST00000429678 537 ntBASIC0.56□□□□□ -2.32
USH2AO75445 AL157827.1-201ENST00000447622 132 ntBASIC0.56□□□□□ -2.32
USH2AO75445 AC093852.1-201ENST00000503587 266 ntBASIC0.56□□□□□ -2.32
USH2AO75445 ATG10-AS1-201ENST00000504846 648 ntBASIC0.56□□□□□ -2.32
USH2AO75445 U6.98-201ENST00000637157 84 ntBASIC0.56□□□□□ -2.32
USH2AO75445 LRRC77P-213ENST00000637727 880 ntBASIC0.56□□□□□ -2.32
USH2AO75445 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.56□□□□□ -2.32
USH2AO75445 SNORA2A-201ENST00000383885 135 ntBASIC0.56□□□□□ -2.32
USH2AO75445 MIR591-201ENST00000385290 95 ntBASIC0.56□□□□□ -2.32
USH2AO75445 RNA5SP118-201ENST00000410385 109 ntBASIC0.56□□□□□ -2.32
USH2AO75445 MIR1468-201ENST00000410600 86 ntBASIC0.56□□□□□ -2.32
USH2AO75445 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC0.56□□□□□ -2.32
USH2AO75445 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC0.56□□□□□ -2.32
USH2AO75445 AC010265.1-201ENST00000513509 211 ntBASIC0.56□□□□□ -2.32
USH2AO75445 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC0.56□□□□□ -2.32
USH2AO75445 AC012321.1-201ENST00000561622 1588 ntBASIC0.56□□□□□ -2.32
USH2AO75445 AC010889.1-201ENST00000566193 2666 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms