Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN2BO60939 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN2BO60939 AL121882.1-201ENST00000422893 417 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 Z82210.1-201ENST00000440037 231 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 EEF1B2P7-201ENST00000451177 676 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 AP1S2P1-201ENST00000457344 379 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 RNU7-140P-201ENST00000459546 60 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SCN2BO60939 LINC00888-204ENST00000487386 421 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 AC105252.1-201ENST00000503089 286 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 RNU5F-8P-201ENST00000515941 111 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 RPL7P20-201ENST00000520308 745 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 AC027309.2-201ENST00000520566 192 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 NDUFS5P6-201ENST00000529136 295 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 AC118942.1-201ENST00000529674 1035 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN2BO60939 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN2BO60939 AL391261.3-201ENST00000557194 520 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 AC027176.1-201ENST00000560204 514 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 AC234778.2-201ENST00000566241 354 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 AL035411.2-201ENST00000604022 421 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SCN2BO60939 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.19□□□□□ -2.06
SCN2BO60939 AC008498.1-201ENST00000613012 531 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 AL450472.3-201ENST00000615578 367 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SCN2BO60939 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 OR4G2P-202ENST00000641004 1759 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN2BO60939 AC005336.3-201ENST00000623833 2679 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.18□□□□□ -2.06
SCN2BO60939 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SCN2BO60939 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SCN2BO60939 RNU6-741P-201ENST00000383889 107 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SCN2BO60939 USP12PX-201ENST00000432383 1057 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 RPS15AP28-201ENST00000435088 386 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 BNIP3P2-201ENST00000441221 577 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN2BO60939 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN2BO60939 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN2BO60939 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN2BO60939 AL353691.1-201ENST00000451332 387 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 MTCO3P11-201ENST00000455103 774 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 ANKRD26P4-201ENST00000455755 950 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 AC097493.1-201ENST00000463958 372 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 AC023141.11-201ENST00000508864 202 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.18□□□□□ -2.06
SCN2BO60939 AC021269.2-201ENST00000532318 330 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN2BO60939 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN2BO60939 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN2BO60939 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN2BO60939 MIR4666A-201ENST00000580160 79 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 AL390838.2-201ENST00000602394 274 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 AC021749.1-201ENST00000604322 607 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN2BO60939 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN2BO60939 MIR6766-201ENST00000622641 72 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 AC004009.2-201ENST00000623016 728 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 AC073592.7-201ENST00000623659 507 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 SCARNA15.3-201ENST00000626315 122 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 SCARNA4.1-201ENST00000628597 123 ntBASIC2.18□□□□□ -2.06
SCN2BO60939 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN2BO60939 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCN2BO60939 MTCO1P9-201ENST00000505577 1534 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 AC097714.1-201ENST00000511272 1647 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCN2BO60939 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 RNU6-657P-201ENST00000383904 107 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 RNU6-217P-201ENST00000384164 104 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 RNU6-481P-201ENST00000384194 107 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 HMGB1P17-201ENST00000403495 628 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 TAF13P2-201ENST00000416876 286 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN2BO60939 MTND2P5-201ENST00000432656 1006 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN2BO60939 PGBD4P3-201ENST00000440731 581 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 AC104435.1-201ENST00000483483 166 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.17□□□□□ -2.06
SCN2BO60939 AC234781.5-201ENST00000508429 271 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 AC010460.2-201ENST00000509054 677 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.17□□□□□ -2.06
SCN2BO60939 RNU1-103P-201ENST00000516502 125 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 SNORA31.22-201ENST00000517204 135 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN2BO60939 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN2BO60939 AC135628.1-201ENST00000568867 534 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 LARP7P2-201ENST00000575306 125 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 ISCA1P3-201ENST00000577104 373 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN2BO60939 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN2BO60939 AC091946.2-201ENST00000606105 291 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 AC004067.1-201ENST00000608733 700 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.17□□□□□ -2.06
SCN2BO60939 U6.101-201ENST00000637707 76 ntBASIC2.17□□□□□ -2.06
SCN2BO60939 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms