Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM13O60858 AC140479.3-201ENST00000418944 1126 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM13O60858 AC236972.1-201ENST00000433225 199 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM13O60858 AC108734.1-201ENST00000439549 399 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM13O60858 AL162388.1-201ENST00000450912 352 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM13O60858 SCARNA10-201ENST00000459255 330 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 PLGLA-201ENST00000465668 449 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 FO393415.2-201ENST00000480085 343 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 RPL36AP41-201ENST00000493820 306 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM13O60858 AC022493.2-201ENST00000506122 481 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 PPBPP1-201ENST00000510807 373 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 IGLV3-26-201ENST00000520756 302 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 OR4P1P-201ENST00000530808 1136 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.48□□□□□ -1.69
TRIM13O60858 AC008033.2-201ENST00000542626 177 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM13O60858 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM13O60858 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
TRIM13O60858 AC010201.1-201ENST00000605051 540 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 AP002799.1-201ENST00000623552 423 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 AC011460.1-201ENST00000636268 1834 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM13O60858 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM13O60858 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
TRIM13O60858 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM13O60858 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
TRIM13O60858 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TRIM13O60858 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM13O60858 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM13O60858 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TRIM13O60858 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
TRIM13O60858 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM13O60858 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TRIM13O60858 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRIM13O60858 RNA5SP305-201ENST00000362665 119 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 Y_RNA.424-201ENST00000384063 103 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 Y_RNA.477-201ENST00000384352 108 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 RNU6-146P-201ENST00000384602 108 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 MIR765-201ENST00000390226 114 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 U3.20-201ENST00000390909 217 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 MIR450B-201ENST00000401182 78 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 RN7SKP206-201ENST00000410823 293 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM13O60858 FTH1P1-201ENST00000437933 532 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 AC073910.1-201ENST00000445047 438 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 RPL23AP43-201ENST00000446445 471 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 MTND4LP30-201ENST00000454092 297 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 RPL39P38-201ENST00000467018 153 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 AL136126.1-201ENST00000473603 402 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM13O60858 AC026784.1-201ENST00000507986 352 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 AC015795.1-201ENST00000513669 327 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 RNU6-120P-201ENST00000516077 103 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 RNU6-189P-201ENST00000516120 101 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 Y_RNA.700-201ENST00000516806 100 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM13O60858 OR5D17P-201ENST00000531492 978 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM13O60858 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM13O60858 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM13O60858 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM13O60858 AC105129.1-201ENST00000560250 297 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM13O60858 AC011487.3-201ENST00000593607 453 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 SUMO2P15-201ENST00000604285 278 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 AC245517.5-201ENST00000611529 162 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 DUSP12P1-201ENST00000612874 516 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 ATP5A1P2-202ENST00000616464 443 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 LINC00901.1-201ENST00000617252 152 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM13O60858 AC103858.2-201ENST00000621471 543 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 AL357559.1-201ENST00000622228 274 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM13O60858 U6.114-201ENST00000636407 96 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM13O60858 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM13O60858 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM13O60858 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM13O60858 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM13O60858 Z95327.2-201ENST00000414579 1873 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM13O60858 SAGE4P-201ENST00000442271 3381 ntBASIC4.47□□□□□ -1.69
TRIM13O60858 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.46□□□□□ -1.69
TRIM13O60858 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.46□□□□□ -1.69
TRIM13O60858 AL451142.2-201ENST00000429076 2090 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM13O60858 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM13O60858 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM13O60858 Y_RNA.39-201ENST00000362620 98 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 RNU1-130P-201ENST00000363930 160 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 Y_RNA.222-201ENST00000364264 102 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 Y_RNA.276-201ENST00000364732 109 ntBASIC4.46□□□□□ -1.7
TRIM13O60858 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM13O60858 Y_RNA.518-201ENST00000384552 113 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms