Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PHF1O43189 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
PHF1O43189 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.88□□□□□ -1.95
PHF1O43189 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PHF1O43189 RPL7P26-201ENST00000333817 754 ntBASIC2.88□□□□□ -1.95
PHF1O43189 RNU6-28P-201ENST00000362378 107 ntBASIC2.88□□□□□ -1.95
PHF1O43189 SNORA5B-201ENST00000363786 132 ntBASIC2.88□□□□□ -1.95
PHF1O43189 RNU5E-5P-201ENST00000365379 116 ntBASIC2.88□□□□□ -1.95
PHF1O43189 RNU6-1119P-201ENST00000384349 108 ntBASIC2.88□□□□□ -1.95
PHF1O43189 Y_RNA.505-201ENST00000384489 102 ntBASIC2.88□□□□□ -1.95
PHF1O43189 RNU6-821P-201ENST00000390995 107 ntBASIC2.88□□□□□ -1.95
PHF1O43189 DEFB108C-201ENST00000400154 252 ntBASIC2.88□□□□□ -1.95
PHF1O43189 RPL5P18-201ENST00000406671 891 ntBASIC2.88□□□□□ -1.95
PHF1O43189 RNU2-15P-201ENST00000410692 191 ntBASIC2.88□□□□□ -1.95
PHF1O43189 RNU6-248P-201ENST00000410720 107 ntBASIC2.88□□□□□ -1.95
PHF1O43189 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.88□□□□□ -1.95
PHF1O43189 RPL21P32-201ENST00000419877 477 ntBASIC2.88□□□□□ -1.95
PHF1O43189 ZNF885P-201ENST00000420174 1098 ntBASIC2.88□□□□□ -1.95
PHF1O43189 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PHF1O43189 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.88□□□□□ -1.95
PHF1O43189 AC025750.2-201ENST00000442609 450 ntBASIC2.88□□□□□ -1.95
PHF1O43189 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.88□□□□□ -1.95
PHF1O43189 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.88□□□□□ -1.95
PHF1O43189 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.88□□□□□ -1.95
PHF1O43189 SNORD42A-201ENST00000459584 64 ntBASIC2.88□□□□□ -1.95
PHF1O43189 AC011825.1-201ENST00000484967 388 ntBASIC2.88□□□□□ -1.95
PHF1O43189 FAM172BP-201ENST00000487497 1089 ntBASIC2.88□□□□□ -1.95
PHF1O43189 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.88□□□□□ -1.95
PHF1O43189 AC034222.1-201ENST00000494052 532 ntBASIC2.88□□□□□ -1.95
PHF1O43189 AC097462.2-201ENST00000504623 481 ntBASIC2.88□□□□□ -1.95
PHF1O43189 ARL2BPP4-201ENST00000506854 471 ntBASIC2.88□□□□□ -1.95
PHF1O43189 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.88□□□□□ -1.95
PHF1O43189 AC010625.1-201ENST00000511296 403 ntBASIC2.88□□□□□ -1.95
PHF1O43189 SNORA64.4-201ENST00000516632 81 ntBASIC2.88□□□□□ -1.95
PHF1O43189 RN7SKP116-201ENST00000516902 319 ntBASIC2.88□□□□□ -1.95
PHF1O43189 RNU6-714P-201ENST00000516963 103 ntBASIC2.88□□□□□ -1.95
PHF1O43189 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.88□□□□□ -1.95
PHF1O43189 SETP7-201ENST00000552169 453 ntBASIC2.88□□□□□ -1.95
PHF1O43189 AL157394.1-201ENST00000562983 1224 ntBASIC2.88□□□□□ -1.95
PHF1O43189 AC107954.1-201ENST00000565906 727 ntBASIC2.88□□□□□ -1.95
PHF1O43189 AC012213.3-201ENST00000577199 777 ntBASIC2.88□□□□□ -1.95
PHF1O43189 AC006023.1-201ENST00000603944 259 ntBASIC2.88□□□□□ -1.95
PHF1O43189 AL136363.2-201ENST00000604173 851 ntBASIC2.88□□□□□ -1.95
PHF1O43189 AC006329.2-201ENST00000611491 394 ntBASIC2.88□□□□□ -1.95
PHF1O43189 MIR7106-201ENST00000612419 65 ntBASIC2.88□□□□□ -1.95
PHF1O43189 AC010678.1-201ENST00000614118 713 ntBASIC2.88□□□□□ -1.95
PHF1O43189 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.88□□□□□ -1.95
PHF1O43189 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.88□□□□□ -1.95
PHF1O43189 AC099654.13-201ENST00000639774 207 ntBASIC2.88□□□□□ -1.95
PHF1O43189 AL035425.3-201ENST00000564206 4996 ntBASIC2.88□□□□□ -1.95
PHF1O43189 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PHF1O43189 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PHF1O43189 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PHF1O43189 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PHF1O43189 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PHF1O43189 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.87□□□□□ -1.95
PHF1O43189 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PHF1O43189 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PHF1O43189 RNU4-75P-201ENST00000364621 146 ntBASIC2.87□□□□□ -1.95
PHF1O43189 RNU6-805P-201ENST00000365643 106 ntBASIC2.87□□□□□ -1.95
PHF1O43189 Y_RNA.548-201ENST00000384656 105 ntBASIC2.87□□□□□ -1.95
PHF1O43189 Y_RNA.559-201ENST00000384686 107 ntBASIC2.87□□□□□ -1.95
PHF1O43189 MTCYBP36-201ENST00000404146 440 ntBASIC2.87□□□□□ -1.95
PHF1O43189 RNU2-16P-201ENST00000410712 136 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AC007899.1-201ENST00000412776 775 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AC126124.2-201ENST00000413542 321 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AL356968.1-201ENST00000416622 474 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.87□□□□□ -1.95
PHF1O43189 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.87□□□□□ -1.95
PHF1O43189 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.87□□□□□ -1.95
PHF1O43189 BX890604.2-201ENST00000427883 474 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PHF1O43189 DLGAP5P1-201ENST00000430307 464 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.87□□□□□ -1.95
PHF1O43189 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.87□□□□□ -1.95
PHF1O43189 PGBD4P3-201ENST00000440731 581 ntBASIC2.87□□□□□ -1.95
PHF1O43189 RPL7P36-201ENST00000444633 681 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AC125238.1-201ENST00000448842 249 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.87□□□□□ -1.95
PHF1O43189 TPT1P7-201ENST00000458300 517 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AC021205.2-201ENST00000480069 347 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.87□□□□□ -1.95
PHF1O43189 AC116347.2-201ENST00000514912 523 ntBASIC2.87□□□□□ -1.95
PHF1O43189 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AP003497.1-201ENST00000528472 562 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AP002748.2-201ENST00000528671 348 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.87□□□□□ -1.95
PHF1O43189 TRAV37-201ENST00000553906 342 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AC012182.1-201ENST00000570133 895 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AC090615.1-201ENST00000577519 154 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.87□□□□□ -1.95
PHF1O43189 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.87□□□□□ -1.95
PHF1O43189 MIR3611-201ENST00000584484 83 ntBASIC2.87□□□□□ -1.95
PHF1O43189 MIR548AB-201ENST00000584917 84 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.87□□□□□ -1.95
PHF1O43189 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.87□□□□□ -1.95
PHF1O43189 AC005771.1-201ENST00000585581 349 ntBASIC2.87□□□□□ -1.95
PHF1O43189 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.87□□□□□ -1.95
PHF1O43189 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.87□□□□□ -1.95
PHF1O43189 AC004853.1-201ENST00000604902 698 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms