Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXN1O15353 FO082796.1-201ENST00000523795 183 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 CKAP2P1-201ENST00000555477 2049 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 SUB1P2-201ENST00000556401 297 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXN1O15353 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXN1O15353 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXN1O15353 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXN1O15353 TPMTP1-201ENST00000592307 737 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AC124312.5-201ENST00000604451 268 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AL359999.1-201ENST00000604513 294 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AC024940.5-201ENST00000622889 474 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXN1O15353 AC026634.1-201ENST00000634369 198 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 TPTEP1-208ENST00000636884 213 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN1O15353 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXN1O15353 MFSD8-236ENST00000641509 4050 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN1O15353 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN1O15353 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
FOXN1O15353 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN1O15353 IPO8P1-201ENST00000455509 3109 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN1O15353 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN1O15353 AC046144.1-201ENST00000478559 1853 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN1O15353 AC009313.2-201ENST00000417893 1941 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
FOXN1O15353 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
FOXN1O15353 RN7SKP32-201ENST00000410167 303 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXN1O15353 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXN1O15353 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.41□□□□□ -1.7
FOXN1O15353 MTND3P2-201ENST00000438452 342 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXN1O15353 RPL7P12-201ENST00000446719 750 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXN1O15353 AC243772.1-201ENST00000451620 410 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 FGF7P3-201ENST00000454645 303 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 RPL21P11-201ENST00000461458 483 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
FOXN1O15353 RN7SL504P-201ENST00000494496 287 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXN1O15353 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXN1O15353 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXN1O15353 RNU6-347P-201ENST00000516658 105 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXN1O15353 AC103843.2-201ENST00000530523 682 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXN1O15353 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXN1O15353 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXN1O15353 AC055876.1-202ENST00000567053 138 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 AC090312.2-201ENST00000582687 378 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 MIR3171-201ENST00000584270 74 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXN1O15353 AC006504.6-201ENST00000590142 199 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 AL355802.3-201ENST00000607571 545 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 AP001521.1-201ENST00000609150 300 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 AC105429.2-201ENST00000610567 517 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 AC243773.3-201ENST00000613270 256 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXN1O15353 AC138649.5-201ENST00000637456 137 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN1O15353 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXN1O15353 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXN1O15353 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN1O15353 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN1O15353 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
FOXN1O15353 AC107027.3-201ENST00000565095 3473 ntBASIC4.41□□□□□ -1.7
FOXN1O15353 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN1O15353 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXN1O15353 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXN1O15353 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.4□□□□□ -1.7
FOXN1O15353 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
FOXN1O15353 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXN1O15353 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
FOXN1O15353 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXN1O15353 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FOXN1O15353 RNU1-39P-201ENST00000383897 165 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FOXN1O15353 RPS20P2-201ENST00000402520 389 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 MIR1305-201ENST00000408300 86 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 RNU6-1068P-201ENST00000410958 103 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 AC073136.2-201ENST00000417282 849 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXN1O15353 FTH1P1-201ENST00000437933 532 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 RPL22P17-201ENST00000438729 315 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 NDUFA5P7-201ENST00000452914 242 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 Y_RNA.632-201ENST00000459189 102 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 AC083798.1-201ENST00000472671 131 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 RPS3AP50-201ENST00000487064 803 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXN1O15353 BTF3L4P4-201ENST00000506381 449 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 AC112206.3-201ENST00000514578 389 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXN1O15353 COX6B1P6-201ENST00000522347 255 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXN1O15353 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms