Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.17□□□□□ -2.06
CHD1O14646 MIR203B-201ENST00000636080 86 ntBASIC2.17□□□□□ -2.06
CHD1O14646 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CHD1O14646 DDX43P2-201ENST00000604753 1354 ntBASIC2.17□□□□□ -2.06
CHD1O14646 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.17□□□□□ -2.06
CHD1O14646 FABP5P3-201ENST00000437960 408 ntBASIC2.17□□□□□ -2.06
CHD1O14646 MTCO1P48-201ENST00000448024 1096 ntBASIC2.17□□□□□ -2.06
CHD1O14646 DPPA3P1-201ENST00000448050 469 ntBASIC2.17□□□□□ -2.06
CHD1O14646 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CHD1O14646 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.17□□□□□ -2.06
CHD1O14646 NPM1P52-201ENST00000518264 846 ntBASIC2.17□□□□□ -2.06
CHD1O14646 AC087854.1-201ENST00000519706 414 ntBASIC2.17□□□□□ -2.06
CHD1O14646 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.17□□□□□ -2.06
CHD1O14646 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.17□□□□□ -2.06
CHD1O14646 DUXAP5-201ENST00000529668 529 ntBASIC2.17□□□□□ -2.06
CHD1O14646 MIR3935-201ENST00000583472 104 ntBASIC2.17□□□□□ -2.06
CHD1O14646 AL161912.3-201ENST00000605404 628 ntBASIC2.17□□□□□ -2.06
CHD1O14646 AC138915.1-201ENST00000565427 1685 ntBASIC2.16□□□□□ -2.06
CHD1O14646 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CHD1O14646 RNU6-799P-201ENST00000363567 107 ntBASIC2.16□□□□□ -2.06
CHD1O14646 SNORA51.2-201ENST00000364595 132 ntBASIC2.16□□□□□ -2.06
CHD1O14646 CD24P4-201ENST00000382840 243 ntBASIC2.16□□□□□ -2.06
CHD1O14646 SNORA40.6-201ENST00000391153 128 ntBASIC2.16□□□□□ -2.06
CHD1O14646 RPL26P37-201ENST00000411983 438 ntBASIC2.16□□□□□ -2.06
CHD1O14646 AL121871.1-201ENST00000443413 436 ntBASIC2.16□□□□□ -2.06
CHD1O14646 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.16□□□□□ -2.06
CHD1O14646 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.16□□□□□ -2.06
CHD1O14646 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.16□□□□□ -2.06
CHD1O14646 OR5H4P-201ENST00000510851 923 ntBASIC2.16□□□□□ -2.06
CHD1O14646 Y_RNA.675-201ENST00000516389 149 ntBASIC2.16□□□□□ -2.06
CHD1O14646 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.16□□□□□ -2.06
CHD1O14646 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.16□□□□□ -2.06
CHD1O14646 MIR5000-201ENST00000577717 103 ntBASIC2.16□□□□□ -2.06
CHD1O14646 AC009220.3-201ENST00000604318 586 ntBASIC2.16□□□□□ -2.06
CHD1O14646 AL355816.1-201ENST00000607951 118 ntBASIC2.16□□□□□ -2.06
CHD1O14646 AC007275.1-201ENST00000621243 671 ntBASIC2.16□□□□□ -2.06
CHD1O14646 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.16□□□□□ -2.06
CHD1O14646 AC110792.3-201ENST00000595906 1614 ntBASIC2.16□□□□□ -2.06
CHD1O14646 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
CHD1O14646 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
CHD1O14646 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.15□□□□□ -2.07
CHD1O14646 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.15□□□□□ -2.07
CHD1O14646 AC090774.1-201ENST00000435925 246 ntBASIC2.15□□□□□ -2.07
CHD1O14646 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.15□□□□□ -2.07
CHD1O14646 AL133507.1-201ENST00000605269 557 ntBASIC2.15□□□□□ -2.07
CHD1O14646 AL161734.1-201ENST00000609720 557 ntBASIC2.15□□□□□ -2.07
CHD1O14646 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.14□□□□□ -2.07
CHD1O14646 RNU6-882P-201ENST00000391025 103 ntBASIC2.14□□□□□ -2.07
CHD1O14646 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.14□□□□□ -2.07
CHD1O14646 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.14□□□□□ -2.07
CHD1O14646 SNORD121B-201ENST00000458838 81 ntBASIC2.14□□□□□ -2.07
CHD1O14646 AC090096.1-201ENST00000489168 390 ntBASIC2.14□□□□□ -2.07
CHD1O14646 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.14□□□□□ -2.07
CHD1O14646 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.14□□□□□ -2.07
CHD1O14646 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.14□□□□□ -2.07
CHD1O14646 SUB1P1-201ENST00000524415 382 ntBASIC2.14□□□□□ -2.07
CHD1O14646 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.14□□□□□ -2.07
CHD1O14646 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.14□□□□□ -2.07
CHD1O14646 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.14□□□□□ -2.07
CHD1O14646 AC034236.3-201ENST00000605999 461 ntBASIC2.14□□□□□ -2.07
CHD1O14646 ICE2P2-201ENST00000483823 2787 ntBASIC2.14□□□□□ -2.07
CHD1O14646 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHD1O14646 AC135776.4-201ENST00000624300 1904 ntBASIC2.14□□□□□ -2.07
CHD1O14646 HSPE1P11-201ENST00000339579 310 ntBASIC2.14□□□□□ -2.07
CHD1O14646 Y_RNA.393-201ENST00000383936 102 ntBASIC2.14□□□□□ -2.07
CHD1O14646 RNY1P4-201ENST00000384595 115 ntBASIC2.14□□□□□ -2.07
CHD1O14646 AL357078.2-201ENST00000416486 427 ntBASIC2.14□□□□□ -2.07
CHD1O14646 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.14□□□□□ -2.07
CHD1O14646 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.14□□□□□ -2.07
CHD1O14646 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.14□□□□□ -2.07
CHD1O14646 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.13□□□□□ -2.07
CHD1O14646 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CHD1O14646 RNU6-600P-201ENST00000362524 99 ntBASIC2.13□□□□□ -2.07
CHD1O14646 MORF4L1P7-201ENST00000426038 703 ntBASIC2.13□□□□□ -2.07
CHD1O14646 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.13□□□□□ -2.07
CHD1O14646 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.13□□□□□ -2.07
CHD1O14646 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.13□□□□□ -2.07
CHD1O14646 SUB1P4-201ENST00000566062 339 ntBASIC2.13□□□□□ -2.07
CHD1O14646 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.13□□□□□ -2.07
CHD1O14646 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.13□□□□□ -2.07
CHD1O14646 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
CHD1O14646 HMGN1P14-201ENST00000412459 517 ntBASIC2.12□□□□□ -2.07
CHD1O14646 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.12□□□□□ -2.07
CHD1O14646 AL022400.1-201ENST00000423946 935 ntBASIC2.12□□□□□ -2.07
CHD1O14646 UBE2V1P13-201ENST00000436983 439 ntBASIC2.12□□□□□ -2.07
CHD1O14646 RPL23AP33-201ENST00000442301 452 ntBASIC2.12□□□□□ -2.07
CHD1O14646 COX6CP12-201ENST00000446748 202 ntBASIC2.12□□□□□ -2.07
CHD1O14646 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.12□□□□□ -2.07
CHD1O14646 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.12□□□□□ -2.07
CHD1O14646 OR4R1P-201ENST00000529879 463 ntBASIC2.12□□□□□ -2.07
CHD1O14646 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CHD1O14646 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.12□□□□□ -2.07
CHD1O14646 MIR6840-201ENST00000611937 71 ntBASIC2.12□□□□□ -2.07
CHD1O14646 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
CHD1O14646 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CHD1O14646 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CHD1O14646 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CHD1O14646 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.11□□□□□ -2.07
CHD1O14646 HMGN2P30-201ENST00000423237 256 ntBASIC2.11□□□□□ -2.07
CHD1O14646 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms