Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC068790.3-201ENST00000602988 553 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 RPP40P2-201ENST00000603596 712 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC016925.2-201ENST00000605108 242 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC117490.2-201ENST00000610042 594 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AL589743.7-201ENST00000612637 233 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AL442067.2-201ENST00000614033 363 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR7974-201ENST00000615835 79 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR7975-201ENST00000619350 68 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 U6.105-201ENST00000637379 88 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU6-1155P-201ENST00000363554 107 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 SNORD48-201ENST00000364953 64 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU6-882P-201ENST00000391025 103 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 POLHP1-201ENST00000411806 470 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 SPA17P1-201ENST00000416656 452 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC074117.2-201ENST00000417130 397 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC004975.1-201ENST00000428733 208 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC012497.1-201ENST00000429392 575 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 GTF2IP7-202ENST00000436677 309 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 OR10R1P-201ENST00000441524 1141 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 RPS26P30-201ENST00000443431 335 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 HMGB1P36-201ENST00000487709 576 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU5A-7P-201ENST00000515979 116 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 TRAV11-201ENST00000539512 339 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC007448.1-201ENST00000582714 234 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC105224.1-201ENST00000587055 421 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AP001269.3-201ENST00000588718 329 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AF230666.2-201ENST00000602328 725 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC007938.3-201ENST00000604965 623 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC010738.1-201ENST00000604970 987 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AL137246.1-201ENST00000607072 977 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC069294.1-201ENST00000608397 350 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC018926.3-201ENST00000618841 406 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 MTND5P10-201ENST00000603719 1809 ntBASIC0.92□□□□□ -2.26
CHKB-CPT1BH3BT56 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AL049641.1-201ENST00000441055 1948 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 CDC27P3-201ENST00000635418 1910 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AL356292.1-201ENST00000283110 373 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR325-201ENST00000385260 98 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AL356421.1-201ENST00000403255 413 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 RNA5SP425-201ENST00000410336 112 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 RPL30P13-201ENST00000418873 348 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 UBE2D3P1-201ENST00000436669 444 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 MTND6P13-201ENST00000443510 523 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 RPS29P23-201ENST00000458635 123 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AC098591.2-201ENST00000510152 315 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AC109464.2-201ENST00000510242 943 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 SNORA31.6-201ENST00000516241 130 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AC107953.1-201ENST00000522216 297 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 OR4P1P-201ENST00000530808 1136 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AC233702.2-202ENST00000562547 291 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR5089-201ENST00000580047 84 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 RN7SL753P-201ENST00000581238 290 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AC013553.2-201ENST00000604244 589 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 PRR13P7-201ENST00000605538 430 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 AL592148.2-201ENST00000612210 372 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR6817-201ENST00000615588 66 ntBASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
CHKB-CPT1BH3BT56 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
CHKB-CPT1BH3BT56 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.26
CHKB-CPT1BH3BT56 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU1-42P-201ENST00000364033 160 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 SNORA58B-201ENST00000364259 136 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms