Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.09□□□□□ -2.23
COL6A5A8TX70 AC004223.1-201ENST00000479840 271 ntBASIC1.09□□□□□ -2.23
COL6A5A8TX70 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.09□□□□□ -2.23
COL6A5A8TX70 MTCO1P30-201ENST00000515244 580 ntBASIC1.09□□□□□ -2.23
COL6A5A8TX70 AC006270.2-201ENST00000578523 652 ntBASIC1.09□□□□□ -2.23
COL6A5A8TX70 AC011468.4-201ENST00000603942 409 ntBASIC1.09□□□□□ -2.23
COL6A5A8TX70 AP000553.5-201ENST00000641933 54 ntBASIC1.09□□□□□ -2.23
COL6A5A8TX70 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.09□□□□□ -2.23
COL6A5A8TX70 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.09□□□□□ -2.23
COL6A5A8TX70 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.09□□□□□ -2.24
COL6A5A8TX70 MIR758-201ENST00000390227 88 ntBASIC1.09□□□□□ -2.24
COL6A5A8TX70 SSXP9-201ENST00000417503 292 ntBASIC1.09□□□□□ -2.24
COL6A5A8TX70 CBX3P6-201ENST00000430257 527 ntBASIC1.09□□□□□ -2.24
COL6A5A8TX70 RPL23AP7-203ENST00000449021 469 ntBASIC1.09□□□□□ -2.24
COL6A5A8TX70 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.09□□□□□ -2.24
COL6A5A8TX70 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.09□□□□□ -2.24
COL6A5A8TX70 AC087373.1-201ENST00000524920 491 ntBASIC1.09□□□□□ -2.24
COL6A5A8TX70 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.09□□□□□ -2.24
COL6A5A8TX70 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.09□□□□□ -2.24
COL6A5A8TX70 AP001029.3-201ENST00000588063 596 ntBASIC1.09□□□□□ -2.24
COL6A5A8TX70 AL161912.3-201ENST00000605404 628 ntBASIC1.09□□□□□ -2.24
COL6A5A8TX70 AC116447.1-201ENST00000613153 453 ntBASIC1.09□□□□□ -2.24
COL6A5A8TX70 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 RNA5SP393-201ENST00000363423 117 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 RPL26P37-201ENST00000411983 438 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 AC109780.2-201ENST00000413467 845 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 FABP5P3-201ENST00000437960 408 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 HMGN1P8-201ENST00000463578 288 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 AC110792.2-201ENST00000510278 224 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 AC146944.4-201ENST00000602697 718 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
COL6A5A8TX70 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
COL6A5A8TX70 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COL6A5A8TX70 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 AL596276.1-201ENST00000434465 418 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 GTF2IP7-202ENST00000436677 309 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 TPRKBP1-201ENST00000456243 481 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 RPL21P39-201ENST00000463605 483 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 RPL21P93-201ENST00000480465 489 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 AC233702.1-201ENST00000482905 502 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 AC093591.1-201ENST00000491435 481 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
COL6A5A8TX70 SETP2-201ENST00000553886 926 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 AP000676.4-201ENST00000624659 623 ntBASIC1.08□□□□□ -2.24
COL6A5A8TX70 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
COL6A5A8TX70 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
COL6A5A8TX70 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
COL6A5A8TX70 U8.1-201ENST00000362843 134 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 Y_RNA.559-201ENST00000384686 107 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.07□□□□□ -2.24
COL6A5A8TX70 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 RPS15AP7-201ENST00000439294 405 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A5A8TX70 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.07□□□□□ -2.24
COL6A5A8TX70 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.07□□□□□ -2.24
COL6A5A8TX70 RNA5SP82-201ENST00000516707 92 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
COL6A5A8TX70 AP003072.2-201ENST00000527756 676 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A5A8TX70 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A5A8TX70 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.07□□□□□ -2.24
COL6A5A8TX70 FAM157A-202ENST00000615155 405 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
COL6A5A8TX70 RNU1-23P-201ENST00000363361 144 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 SNORD114-23-201ENST00000363536 72 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 PTP4A1P1-201ENST00000420539 515 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 NEFMP1-201ENST00000443423 1006 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 RPL7P31-201ENST00000450192 724 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 Y_RNA.644-201ENST00000459006 113 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 AC090453.1-201ENST00000495560 436 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A5A8TX70 RNU6-1334P-201ENST00000516032 105 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.07□□□□□ -2.24
COL6A5A8TX70 PRELID2P1-201ENST00000552837 301 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 MIR5694-201ENST00000581190 76 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.07□□□□□ -2.24
COL6A5A8TX70 SNHG22-203ENST00000617833 660 ntBASIC1.07□□□□□ -2.24
COL6A5A8TX70 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
COL6A5A8TX70 AL596028.1-201ENST00000326971 197 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 RNU1-109P-201ENST00000383960 147 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 RNU1-101P-201ENST00000391171 127 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 RNA5SP492-201ENST00000411330 114 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 MTND2P16-201ENST00000419987 799 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.06□□□□□ -2.24
COL6A5A8TX70 XKRYP6-201ENST00000440468 1116 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 XKRYP3-201ENST00000442113 1116 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.06□□□□□ -2.24
COL6A5A8TX70 RPL37P25-201ENST00000507308 276 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms