Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 Z99571.1-201ENST00000636677 394 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 UBE2L2-201ENST00000254302 429 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 RNA5SP46-201ENST00000362370 120 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 RNU1-83P-201ENST00000363426 164 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 RNU4-50P-201ENST00000364361 141 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 RNU6-395P-201ENST00000365662 106 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AL513475.1-201ENST00000406602 315 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 MIR548I3-201ENST00000408378 149 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 MIR548I1-201ENST00000408810 149 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 RNU2-64P-201ENST00000411315 191 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AL390119.1-201ENST00000440329 312 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 RPS3AP12-201ENST00000443616 753 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 TDGF1P1-201ENST00000445734 527 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 FCF1P4-201ENST00000448326 183 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 SNORD127-201ENST00000458892 86 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 RN7SL799P-201ENST00000475891 298 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 NDUFB4P9-201ENST00000511646 388 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 SNORA25.11-201ENST00000515935 105 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 MIR892C-201ENST00000516410 77 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 RNU6-911P-201ENST00000516523 104 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 Y_RNA.687-201ENST00000516558 91 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 HMGB1P40-201ENST00000525121 540 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 TRAV32-201ENST00000553993 340 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AC068446.3-201ENST00000555285 382 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AL157871.3-201ENST00000557231 293 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AC015720.2-201ENST00000567709 334 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AC006600.1-201ENST00000572529 153 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 MIR6768-201ENST00000610734 72 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 AC103858.2-201ENST00000621471 543 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 DHX9P1-201ENST00000436565 3076 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 OR13C1P-202ENST00000641378 2919 ntBASIC4.38□□□□□ -1.71
SHISA3A0PJX4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHISA3A0PJX4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 RNU4-44P-201ENST00000363050 141 ntBASIC4.37□□□□□ -1.71
SHISA3A0PJX4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 RNU6-1074P-201ENST00000383995 104 ntBASIC4.37□□□□□ -1.71
SHISA3A0PJX4 MIR143-201ENST00000385300 106 ntBASIC4.37□□□□□ -1.71
SHISA3A0PJX4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 SNORA68.2-201ENST00000391263 128 ntBASIC4.37□□□□□ -1.71
SHISA3A0PJX4 DPPA2P3-201ENST00000411853 655 ntBASIC4.37□□□□□ -1.71
SHISA3A0PJX4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 AL592045.1-201ENST00000429867 352 ntBASIC4.37□□□□□ -1.71
SHISA3A0PJX4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 AC064862.4-201ENST00000442180 334 ntBASIC4.37□□□□□ -1.71
SHISA3A0PJX4 RPL36AP39-201ENST00000445859 318 ntBASIC4.37□□□□□ -1.71
SHISA3A0PJX4 KNOP1P3-201ENST00000446933 426 ntBASIC4.37□□□□□ -1.71
SHISA3A0PJX4 AC073587.1-201ENST00000447093 876 ntBASIC4.37□□□□□ -1.71
SHISA3A0PJX4 CEACAMP4-201ENST00000457676 421 ntBASIC4.37□□□□□ -1.71
SHISA3A0PJX4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.37□□□□□ -1.71
SHISA3A0PJX4 RNU4-60P-201ENST00000517239 135 ntBASIC4.37□□□□□ -1.71
SHISA3A0PJX4 AC107918.3-201ENST00000533272 382 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms