Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RNU6-714P-201ENST00000516963 103 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AC024224.1-201ENST00000538284 609 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 RPL21P5-201ENST00000554662 472 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AC027807.1-201ENST00000559921 996 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 TPMTP1-201ENST00000592307 737 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AC012468.1-201ENST00000604888 430 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AC091304.9-201ENST00000612091 226 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AP001506.1-201ENST00000615444 211 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 MTND5P26-201ENST00000426018 1752 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC004925.1-201ENST00000624256 2706 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 RNA5SP258-201ENST00000362750 119 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 RNU6-853P-201ENST00000364306 107 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC006946.1-201ENST00000429106 328 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 C8orf59P1-201ENST00000429930 303 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 HMGB1P15-201ENST00000453854 435 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 snoU109.1-201ENST00000459339 135 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 HMGB1P25-201ENST00000468402 607 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC034222.1-201ENST00000494052 532 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 NDUFB4P2-201ENST00000509515 391 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC091133.4-201ENST00000511142 308 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 RNU2-46P-201ENST00000517038 113 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 RNU6-201P-201ENST00000517100 61 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AP003497.1-201ENST00000528472 562 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC016957.1-201ENST00000534895 309 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 MIR4276-201ENST00000584832 70 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 UBE2L4-201ENST00000587688 464 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 HMGN1P30-201ENST00000589286 268 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC108747.1-201ENST00000609508 535 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC109347.2-201ENST00000610220 349 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC091834.1-201ENST00000614543 472 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AC008250.2-201ENST00000615261 205 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 AL158801.5-201ENST00000623123 465 ntBASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNX9Q9Y5X1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AL356274.2-201ENST00000624379 3752 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 U8.3-201ENST00000363321 132 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 RNU6-263P-201ENST00000363811 107 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 RNA5SP267-201ENST00000364893 126 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 SNORA70.4-201ENST00000365509 134 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 RNU2-15P-201ENST00000410692 191 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AL589872.1-201ENST00000426602 288 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC006548.1-201ENST00000427470 102 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 RPL17P49-201ENST00000443728 411 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC093392.2-201ENST00000450682 337 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 RPL23AP67-201ENST00000465341 474 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC010285.1-201ENST00000470580 392 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC087312.1-201ENST00000471411 480 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AL358832.1-201ENST00000497800 389 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC105252.1-201ENST00000503089 286 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC107401.1-201ENST00000503426 685 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms