Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 Z82198.3-201ENST00000421145 199 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AL354714.3-201ENST00000447284 493 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 PPP1R2P5-201ENST00000457256 603 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 RPS4XP20-201ENST00000505751 772 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AC009901.1-201ENST00000506703 541 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 MIR2114-201ENST00000516645 80 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AC243960.4-201ENST00000600532 288 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 MIR6813-201ENST00000621638 56 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AC091905.2-201ENST00000623143 306 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AL136164.3-201ENST00000624429 3978 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 AC008725.1-201ENST00000605123 2263 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 RN7SKP184-201ENST00000362348 333 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 RNA5SP388-201ENST00000362584 119 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 Y_RNA.167-201ENST00000363735 109 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 RN7SKP269-201ENST00000365545 319 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 RNU6-831P-201ENST00000384548 107 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 MIR191-201ENST00000384873 92 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 BRK1P2-201ENST00000442875 223 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 AL360271.2-201ENST00000447710 161 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 KF459542.1-201ENST00000450908 553 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 PPIAP15-201ENST00000479662 484 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 AC111000.3-201ENST00000508057 576 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 AC011602.1-201ENST00000546484 331 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 AC079600.1-201ENST00000550326 297 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 TRAV37-201ENST00000553906 342 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 MIR4742-201ENST00000581069 85 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 AL355598.1-201ENST00000604169 202 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 AL031601.2-202ENST00000622650 282 ntBASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC6.13□□□□□ -1.43
GTF3C3Q9Y5Q9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AC010733.2-201ENST00000589496 5702 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AL583835.1-201ENST00000399570 407 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 RNU6-607P-201ENST00000411283 108 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 NDUFB1P2-201ENST00000449477 176 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AP006222.1-205ENST00000450734 457 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 ZNF137P-201ENST00000456718 1920 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AC068228.1-201ENST00000461723 211 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AL135752.1-201ENST00000479477 471 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AC022493.1-201ENST00000492984 337 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AC146944.2-203ENST00000502493 354 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AC139495.1-202ENST00000513164 354 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AC112206.3-201ENST00000514578 389 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AC116917.1-201ENST00000520558 305 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AL049872.1-201ENST00000556323 322 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AL645944.1-201ENST00000603857 493 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 uc_338.29-201ENST00000615099 168 ntBASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
GTF3C3Q9Y5Q9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GTF3C3Q9Y5Q9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
GTF3C3Q9Y5Q9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms