Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 POLR2KP2-201ENST00000438155 177 ntBASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 GEMIN2P1-201ENST00000454246 752 ntBASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 AL122020.1-201ENST00000472287 459 ntBASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 RPS27AP9-201ENST00000477681 438 ntBASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 RPL23AP40-201ENST00000487630 390 ntBASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 AL049767.1-202ENST00000637826 242 ntBASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB3Q9Y5E6 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 Y_RNA.75-201ENST00000362927 97 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 RNU6-428P-201ENST00000362942 107 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 Y_RNA.238-201ENST00000364441 102 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 RNU6-17P-201ENST00000384245 107 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 RNU6-18P-201ENST00000384527 107 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 MIR1203-201ENST00000408812 85 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 AL390729.2-201ENST00000416137 156 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 PTGES3P4-201ENST00000426243 356 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 AP000907.1-201ENST00000428428 510 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 RPL36AP39-201ENST00000445859 318 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 RN7SL273P-201ENST00000481561 299 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 AL136038.1-201ENST00000497246 351 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 AC108043.1-201ENST00000512696 574 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 SUMO2P18-201ENST00000518873 252 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 AC005476.1-201ENST00000554427 397 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 BPIFA4P-203ENST00000603168 689 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 AC008121.1-201ENST00000603244 268 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 AL139395.1-201ENST00000603662 160 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 AC008873.1-201ENST00000625051 138 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 AC007938.2-201ENST00000604666 2634 ntBASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB3Q9Y5E6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 RNA5SP361-201ENST00000362686 118 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 RNU2-2P-201ENST00000410396 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 RPL35AP3-201ENST00000414680 288 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 RPL23AP3-201ENST00000453844 468 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 AC079168.2-201ENST00000453977 416 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 RNU6-1211P-201ENST00000459179 105 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 RNU6-1095P-201ENST00000516148 108 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 RN7SKP277-201ENST00000516895 283 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 RNU6-143P-201ENST00000516942 93 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 AC007225.2-201ENST00000562529 256 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 AC055872.1-201ENST00000570978 278 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 AC060780.2-201ENST00000589047 198 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 KLKP1-201ENST00000595979 403 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 AC006115.2-201ENST00000596823 202 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 COX6CP7-201ENST00000597056 208 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 RNU2-4P-201ENST00000606190 192 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 AL008718.3-201ENST00000610217 321 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 U2.15-201ENST00000611544 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 U2.16-201ENST00000613119 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 U2.12-201ENST00000613778 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 U2.9-201ENST00000615427 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 U2.11-201ENST00000616345 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 U2.2-201ENST00000616535 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 U2.3-201ENST00000617785 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 MIR6826-201ENST00000617808 98 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 U2.19-201ENST00000618602 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 RNU2-1-201ENST00000618664 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 U2.6-201ENST00000619225 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 U2.5-201ENST00000619465 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 U2.10-201ENST00000620268 191 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 AC090617.7-201ENST00000623952 126 ntBASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
PCDHB3Q9Y5E6 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms