Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 RPL23AP31-201ENST00000456160 467 ntBASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 AC021382.1-201ENST00000483523 359 ntBASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 MTND2P33-201ENST00000506452 1031 ntBASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 AP001094.1-201ENST00000579805 193 ntBASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 AP001029.3-201ENST00000588063 596 ntBASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 OR10AB1P-201ENST00000609613 938 ntBASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 AC095031.1-201ENST00000623685 672 ntBASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDK11AQ9UQ88 FARSBP1-201ENST00000435808 1778 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 FRG1CP-201ENST00000358464 769 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 Y_RNA.6-201ENST00000362350 114 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 Y_RNA.46-201ENST00000362695 102 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 RNU6-173P-201ENST00000364215 104 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 RNU6-259P-201ENST00000383999 107 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 U3.39-201ENST00000408569 239 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AC127526.1-201ENST00000417526 366 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AC079780.1-201ENST00000428259 207 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AL031667.1-201ENST00000440222 725 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 MTND6P13-201ENST00000443510 523 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AL353691.1-201ENST00000451332 387 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 RPL21P13-201ENST00000488305 481 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 PHBP14-201ENST00000512887 367 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 SNORA18.6-201ENST00000516792 115 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AL157394.1-201ENST00000562983 1224 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AC091834.1-201ENST00000614543 472 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 XIST_intron.1-201ENST00000619444 68 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 AC010149.2-201ENST00000637608 315 ntBASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK11AQ9UQ88 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 U3.20-201ENST00000390909 217 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 RPL7P25-201ENST00000404151 721 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AC112653.1-201ENST00000443851 386 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 RN7SL594P-201ENST00000470590 287 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 RPL23AP41-201ENST00000484754 458 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 NIPA2P2-201ENST00000496376 1083 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 RPL37P25-201ENST00000507308 276 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AC010342.1-201ENST00000514047 877 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AC009063.1-201ENST00000563342 702 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AC034268.2-201ENST00000571784 482 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 MIR5680-201ENST00000577577 84 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 FAM60BP-201ENST00000578364 658 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AP001330.4-201ENST00000604350 154 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 AL365503.1-201ENST00000605247 905 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 RNU6-87P-201ENST00000607561 108 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK11AQ9UQ88 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 SNORA48.5-201ENST00000391143 135 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 RNU2-8P-201ENST00000410727 190 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 BX323014.1-201ENST00000412876 237 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AMD1P2-201ENST00000412936 992 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 C1DP2-201ENST00000418167 426 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AL353777.1-201ENST00000425552 326 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AL121871.1-201ENST00000443413 436 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms