Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.4□□□□□ -1.38
PDZRN3Q9UPQ7 AC138965.3-201ENST00000623875 498 ntBASIC6.4□□□□□ -1.38
PDZRN3Q9UPQ7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.4□□□□□ -1.38
PDZRN3Q9UPQ7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
PDZRN3Q9UPQ7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC6.4□□□□□ -1.39
PDZRN3Q9UPQ7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC6.4□□□□□ -1.39
PDZRN3Q9UPQ7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.4□□□□□ -1.39
PDZRN3Q9UPQ7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDZRN3Q9UPQ7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDZRN3Q9UPQ7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.4□□□□□ -1.39
PDZRN3Q9UPQ7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.4□□□□□ -1.39
PDZRN3Q9UPQ7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 RNU4-7P-201ENST00000364758 141 ntBASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-1130P-201ENST00000365434 107 ntBASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 CTSL3P-202ENST00000412179 788 ntBASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 AC093414.1-201ENST00000434712 514 ntBASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 PABPC1P3-201ENST00000469174 459 ntBASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 RN7SL319P-201ENST00000480656 221 ntBASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 AC026371.1-201ENST00000551867 419 ntBASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 HNRNPCP4-201ENST00000571636 900 ntBASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 AL451044.1-201ENST00000604867 238 ntBASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 AL591926.4-201ENST00000616895 298 ntBASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 U6.101-201ENST00000637707 76 ntBASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 AL672167.1-204ENST00000641875 3017 ntBASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
PDZRN3Q9UPQ7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AC133552.1-201ENST00000569988 4007 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AL391516.1-201ENST00000554380 2449 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AL024474.1-201ENST00000404655 591 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 RN7SKP100-201ENST00000411258 284 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-293P-201ENST00000411259 106 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 TRAPPC2P4-201ENST00000421750 331 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 RPL23AP69-201ENST00000431134 458 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AC114495.1-201ENST00000441274 436 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 RPL23AP31-201ENST00000456160 467 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AC087385.1-201ENST00000475062 312 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 RN7SL809P-201ENST00000482040 297 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 SRI-210ENST00000490437 570 ntTSL 2 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AC012339.2-201ENST00000523996 453 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AC009127.3-201ENST00000570531 403 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AC024619.4-201ENST00000580924 316 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AC105254.2-201ENST00000603636 436 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AC025034.2-201ENST00000623264 286 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 MTND1P7-201ENST00000632801 297 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 SCARNA15-201ENST00000607520 4325 ntBASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PDZRN3Q9UPQ7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-1287P-201ENST00000362914 107 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 RNA5SP267-201ENST00000364893 126 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 Y_RNA.441-201ENST00000384123 112 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 Y_RNA.541-201ENST00000384640 113 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-1060P-201ENST00000384664 107 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 Y_RNA.580-201ENST00000391004 95 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-918P-201ENST00000391219 106 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 MIR298-201ENST00000401212 88 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-272P-201ENST00000411028 104 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 RPLP0P7-201ENST00000416050 667 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 AC017079.2-201ENST00000416102 485 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 RPL18P10-201ENST00000425606 538 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms