Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SDAD1P2-201ENST00000441308 2028 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 RNU6-343P-201ENST00000364709 104 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 RNU1-100P-201ENST00000365255 165 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 SNORA36C-201ENST00000384289 132 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 MIR514A1-201ENST00000385133 98 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 RNU6-952P-201ENST00000391164 108 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 FO393413.1-201ENST00000402892 195 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 BX682237.1-201ENST00000415016 335 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 USP9YP20-201ENST00000419224 558 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 BX322784.1-201ENST00000455793 1077 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 RPS3P1-201ENST00000456781 192 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AC092798.1-201ENST00000458542 409 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 SNORD121B-201ENST00000458838 81 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AC126389.1-201ENST00000477436 290 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AC104982.1-201ENST00000478775 574 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AL049874.1-201ENST00000489560 388 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 TTC39CP1-201ENST00000512513 755 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AC008837.2-201ENST00000513076 418 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 RNY4P37-201ENST00000516225 96 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 SCARNA15.2-201ENST00000516409 127 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AC090079.2-201ENST00000575289 768 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 PART1_2.1-201ENST00000612397 250 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AP000720.1-201ENST00000625091 483 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AC013437.2-201ENST00000639587 677 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 LINC02211-204ENST00000642024 1070 ntBASIC2.75□□□□□ -1.97
CDH9Q9ULB4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.75□□□□□ -1.97
CDH9Q9ULB4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AL672167.1-206ENST00000356293 943 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 RNU6-270P-201ENST00000364131 105 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 SNORD21-201ENST00000383953 95 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 MRPL50P4-201ENST00000446432 475 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AL135752.1-201ENST00000479477 471 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 SEM1P1-201ENST00000506694 209 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AC114781.4-201ENST00000513707 639 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 RNU6-928P-201ENST00000516876 104 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 RNU6-714P-201ENST00000516963 103 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AC091163.3-201ENST00000518269 1144 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AC124947.2-202ENST00000552735 133 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AC020895.1-201ENST00000595362 272 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 RPL23AP78-201ENST00000599928 470 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 BBIP1P1-201ENST00000602999 279 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AC004987.4-201ENST00000603383 338 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AC068313.1-201ENST00000604028 1008 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AC021749.1-201ENST00000604322 607 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AC018645.2-201ENST00000609151 472 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AL359198.2-201ENST00000611836 194 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AL121895.2-201ENST00000619558 447 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AP002371.2-201ENST00000624450 503 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AL138960.2-201ENST00000625145 535 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 OR4G2P-202ENST00000641004 1759 ntBASIC2.74□□□□□ -1.97
CDH9Q9ULB4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH9Q9ULB4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH9Q9ULB4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
CDH9Q9ULB4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH9Q9ULB4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH9Q9ULB4 RNU6-359P-201ENST00000365466 108 ntBASIC2.73□□□□□ -1.97
CDH9Q9ULB4 Y_RNA.472-201ENST00000384322 102 ntBASIC2.73□□□□□ -1.97
CDH9Q9ULB4 SNORD116-12-201ENST00000384468 92 ntBASIC2.73□□□□□ -1.97
CDH9Q9ULB4 MIR325-201ENST00000385260 98 ntBASIC2.73□□□□□ -1.97
CDH9Q9ULB4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CDH9Q9ULB4 SPA17P1-201ENST00000416656 452 ntBASIC2.73□□□□□ -1.97
CDH9Q9ULB4 OR4K11P-201ENST00000431829 904 ntBASIC2.73□□□□□ -1.97
CDH9Q9ULB4 AC129850.1-201ENST00000436203 508 ntBASIC2.73□□□□□ -1.97
CDH9Q9ULB4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH9Q9ULB4 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH9Q9ULB4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH9Q9ULB4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH9Q9ULB4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH9Q9ULB4 AC096571.1-202ENST00000506634 735 ntBASIC2.73□□□□□ -1.97
CDH9Q9ULB4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH9Q9ULB4 RNA5SP148-201ENST00000516527 94 ntBASIC2.73□□□□□ -1.97
CDH9Q9ULB4 RNU6-1256P-201ENST00000516539 103 ntBASIC2.73□□□□□ -1.97
CDH9Q9ULB4 RNU6-1282P-201ENST00000516735 96 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms