Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MYL12AP1-201ENST00000518490 515 ntBASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 AP005597.4-201ENST00000526762 229 ntBASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 AC093012.1-202ENST00000549403 582 ntBASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 POLR3GP2-201ENST00000588366 668 ntBASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 AC079587.1-201ENST00000603846 277 ntBASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 IGHV3-29-201ENST00000604817 344 ntBASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 AC010201.1-201ENST00000605051 540 ntBASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 AC090971.5-201ENST00000621102 293 ntBASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 AC243312.2-201ENST00000623340 601 ntBASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 AL133243.3-201ENST00000617415 3004 ntBASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.58□□□□□ -1.68
PPARGC1AQ9UBK2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AC018529.3-201ENST00000624212 2254 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 LARP1BP1-201ENST00000506036 1359 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 RNU1-32P-201ENST00000363937 159 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 Y_RNA.378-201ENST00000365652 113 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 RNU6-946P-201ENST00000383878 107 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AL732292.1-201ENST00000426692 226 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 DNAJC19P7-201ENST00000428811 344 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 GAPDHP27-201ENST00000447427 1020 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 SNRPGP5-201ENST00000456003 220 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 TRBV1-201ENST00000476502 284 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 RN7SL459P-201ENST00000481078 302 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 CCDC34P1-201ENST00000507441 517 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 Vault.1-201ENST00000516474 102 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 OR11H5P-201ENST00000554039 926 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AL121576.1-201ENST00000556055 276 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 BNIP3P22-201ENST00000593399 556 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AL356218.2-201ENST00000605264 187 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 AC007998.5-201ENST00000622938 237 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 MIR7641-1-201ENST00000627518 61 ntBASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PPARGC1AQ9UBK2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 MTND4P27-201ENST00000450813 1354 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 OR5P1P-201ENST00000299512 925 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 Y_RNA.138-201ENST00000363462 102 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 RNA5SP447-201ENST00000363749 119 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 RNU6-263P-201ENST00000363811 107 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 Y_RNA.259-201ENST00000364619 101 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 Y_RNA.339-201ENST00000365325 102 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 SMIM11P1-201ENST00000369586 178 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 SNORA56-201ENST00000383966 129 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 EIF4E2P1-201ENST00000393781 255 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 RN7SKP167-201ENST00000411047 285 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 RN7SKP216-201ENST00000411050 312 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 POLHP1-201ENST00000411806 470 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 VN1R36P-201ENST00000414936 291 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 AC004801.2-202ENST00000463559 283 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 AC010631.1-201ENST00000474150 156 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 HMGN1P10-201ENST00000474557 553 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 AC012181.1-201ENST00000479895 423 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 AC096576.1-201ENST00000489014 359 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 RN7SL810P-201ENST00000493031 276 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 PPBPP1-201ENST00000510807 373 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 RNU4-60P-201ENST00000517239 135 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 AC008694.2-201ENST00000517591 306 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 AC018630.1-201ENST00000541376 925 ntBASIC4.56□□□□□ -1.68
PPARGC1AQ9UBK2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms