Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AL158801.5-201ENST00000623123 465 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AC099063.3-201ENST00000642066 185 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AC006378.2-201ENST00000623178 2476 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 MIR22-201ENST00000362190 85 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 RNU6-769P-201ENST00000384407 104 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 MIR493-201ENST00000385254 89 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 OR2B8P-201ENST00000432841 938 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 AC091179.1-201ENST00000461606 579 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 AC022690.1-201ENST00000526681 550 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 AP001004.1-201ENST00000582468 324 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 AC002076.2-201ENST00000617362 122 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 AC007318.2-201ENST00000620999 243 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 AC008443.7-201ENST00000622195 246 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 AC079416.3-201ENST00000624479 549 ntBASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMC4Q9NTJ3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 DDX10P1-201ENST00000448545 1933 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 MTND5P33-201ENST00000571250 1450 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 RNY4P24-201ENST00000362735 96 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AC109780.2-201ENST00000413467 845 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 HMGB1P11-201ENST00000413899 637 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 USP9YP26-201ENST00000421008 661 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AC091390.3-201ENST00000426478 338 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 OR2AS1P-201ENST00000427827 319 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 DPPA2P1-201ENST00000428060 556 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 FAM103A2P-201ENST00000444122 354 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AL359385.1-201ENST00000456509 365 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 OR6K1P-201ENST00000456766 971 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 RN7SL75P-201ENST00000461926 281 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 MTND1P22-201ENST00000510572 951 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 RNU6-759P-201ENST00000516740 103 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 HMGN1P28-201ENST00000521340 364 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 BNIP3P23-201ENST00000599655 511 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AC068313.1-201ENST00000604028 1008 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AC025811.1-201ENST00000604312 472 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AL160281.1-201ENST00000605307 311 ntBASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.88□□□□□ -1.79
SMC4Q9NTJ3 RNU6-500P-201ENST00000362349 107 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 RNU5A-1-201ENST00000362698 116 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 RNU6-223P-201ENST00000362830 107 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 SNORA36C-201ENST00000384289 132 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 RN7SKP220-201ENST00000410611 288 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 RNU6-516P-201ENST00000411381 104 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 AL359704.1-201ENST00000411586 781 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 AC117440.1-201ENST00000474107 571 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 AC119751.5-201ENST00000514077 770 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 SNORA74D-201ENST00000516404 141 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 RN7SKP57-201ENST00000517248 293 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 AC013828.2-201ENST00000532487 235 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 AC011260.1-201ENST00000578420 472 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 AC068831.7-201ENST00000616954 363 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 MIR8057-201ENST00000620957 69 ntBASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMC4Q9NTJ3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms