Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 RN7SKP24-201ENST00000515888 284 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 RNU6-202P-201ENST00000515998 96 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 RN7SKP219-201ENST00000516825 296 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 RNU6-410P-201ENST00000517006 107 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG3Q9NT62 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 AL118558.2-201ENST00000556294 238 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 MIR4512-201ENST00000583257 77 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 AF038458.1-201ENST00000588406 262 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 AC012603.1-201ENST00000606424 528 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 uc_338.11-201ENST00000619132 160 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 AC007546.2-201ENST00000623996 360 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG3Q9NT62 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 AC068254.2-201ENST00000623938 3577 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG3Q9NT62 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG3Q9NT62 API5P2-201ENST00000397055 1498 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 Z95331.1-201ENST00000623075 23112 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG3Q9NT62 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 RNU6-1115P-201ENST00000362490 106 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 RNU6-238P-201ENST00000363313 106 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 Y_RNA.167-201ENST00000363735 109 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 Y_RNA.367-201ENST00000365544 101 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 RPL7P60-201ENST00000397636 735 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 SSXP10-201ENST00000402595 565 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 AC092832.1-201ENST00000422934 400 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 FABP5P14-201ENST00000437273 393 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 RPL7L1P1-201ENST00000448259 785 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 RNA5SP246-201ENST00000458909 119 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 AC104564.1-201ENST00000493028 407 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 MRPS35P2-201ENST00000508242 191 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 SNORD27.1-201ENST00000516319 72 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 RNU6-635P-201ENST00000516651 102 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 RN7SKP96-201ENST00000516948 297 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 RNU6-1213P-201ENST00000517075 94 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 AC009812.2-201ENST00000517657 457 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 AC008687.2-201ENST00000597865 520 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 BBIP1P1-201ENST00000602999 279 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 MIR7151-201ENST00000617477 60 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 U6.101-201ENST00000637707 76 ntBASIC5.47□□□□□ -1.53
ATG3Q9NT62 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG3Q9NT62 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG3Q9NT62 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG3Q9NT62 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG3Q9NT62 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG3Q9NT62 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ATG3Q9NT62 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.46□□□□□ -1.53
ATG3Q9NT62 AC007529.1-201ENST00000418574 2178 ntBASIC5.46□□□□□ -1.53
ATG3Q9NT62 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.46□□□□□ -1.53
ATG3Q9NT62 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
ATG3Q9NT62 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
ATG3Q9NT62 RNU6-984P-201ENST00000363236 109 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 Y_RNA.153-201ENST00000363615 91 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 RNU4-48P-201ENST00000365559 182 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG3Q9NT62 RPL7P10-201ENST00000417407 739 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG3Q9NT62 RPL23AP25-201ENST00000430973 463 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.46□□□□□ -1.54
ATG3Q9NT62 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG3Q9NT62 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG3Q9NT62 RPL23AP2-201ENST00000471227 466 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG3Q9NT62 AP001025.2-201ENST00000490908 477 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 SNORD116-26-201ENST00000516006 96 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 RNU6-976P-201ENST00000516086 111 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 RNU6-1038P-201ENST00000516516 104 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 AP005435.4-201ENST00000529514 284 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG3Q9NT62 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG3Q9NT62 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG3Q9NT62 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG3Q9NT62 HSPE1P5-201ENST00000561489 272 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 SULT1C2P1-202ENST00000562418 459 ntBASIC5.46□□□□□ -1.54
ATG3Q9NT62 RPL23AP97-201ENST00000568955 471 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms