Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC022878.1-201ENST00000530684 149 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AP002453.2-201ENST00000533503 320 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 MIR548AB-201ENST00000584917 84 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AC093732.2-201ENST00000607950 274 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AC104073.3-201ENST00000610942 955 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AC009509.4-201ENST00000619202 509 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 CCT4P2-201ENST00000233836 1548 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AC118273.1-201ENST00000525324 3006 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC244517.1-201ENST00000606030 2086 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 FRG1BP-201ENST00000278882 761 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 RNU6-50P-201ENST00000362356 103 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 SNORD67-201ENST00000390833 111 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 U3.20-201ENST00000390909 217 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 RN7SKP220-201ENST00000410611 288 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AL356583.2-201ENST00000426536 280 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 ARF4P2-201ENST00000430209 526 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 UBE2V1P13-201ENST00000436983 439 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 SETP5-201ENST00000437270 562 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC107083.1-201ENST00000439643 279 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 HMGB3P11-201ENST00000440127 604 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC016696.1-201ENST00000446949 318 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AL590365.1-201ENST00000450788 243 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 MTND1P27-201ENST00000451117 902 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 Z82190.1-201ENST00000454534 490 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 MTCO1P42-201ENST00000457379 726 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 snoU109.1-201ENST00000459339 135 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 SNORD42A-201ENST00000459584 64 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC079140.3-201ENST00000511111 550 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC009812.2-201ENST00000517657 457 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC109635.4-202ENST00000531666 412 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AP002404.1-201ENST00000532005 451 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 TGIF1P1-201ENST00000558095 802 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 MIR5047-201ENST00000579212 100 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 BNIP3P8-201ENST00000597863 560 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC068790.2-201ENST00000602601 557 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC112191.3-201ENST00000604371 277 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AL451064.1-201ENST00000607718 471 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC138749.5-201ENST00000611461 208 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC116165.2-201ENST00000616705 206 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AL590240.3-201ENST00000621416 943 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 PLCE1P1-201ENST00000622094 305 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC099506.2-201ENST00000623074 221 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AC098679.4-201ENST00000624241 654 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AL137790.1-201ENST00000634283 177 ntBASIC3.72□□□□□ -1.81
DDX4Q9NQI0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DDX4Q9NQI0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
DDX4Q9NQI0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 OR1S2-201ENST00000302592 978 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 RNU4-78P-201ENST00000410940 126 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AL359704.1-201ENST00000411586 781 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 RPL22P17-201ENST00000438729 315 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AC112653.1-201ENST00000443851 386 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AC140076.1-201ENST00000449897 361 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 SNORD121B-201ENST00000458838 81 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 RPS29P26-201ENST00000477483 171 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AP002748.2-201ENST00000528671 348 ntBASIC3.71□□□□□ -1.82
DDX4Q9NQI0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX4Q9NQI0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms