Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AL137161.1-201ENST00000532231 390 ntBASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 DYNLL1P4-201ENST00000549314 266 ntBASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 AC074140.1-201ENST00000621617 208 ntBASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 AC011155.2-201ENST00000623202 216 ntBASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 AC244517.12-201ENST00000623581 663 ntBASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 AC007823.1-201ENST00000569932 1566 ntBASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.68□□□□□ -1.66
BCAS3Q9H6U6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 ENSAP1-201ENST00000392855 326 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 HDGFP1-201ENST00000405943 252 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 RNU6-628P-201ENST00000410675 107 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 ATG3P1-201ENST00000419507 911 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 RPS29P7-201ENST00000439662 171 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 snoU13.22-201ENST00000459428 104 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 HMGB1P21-201ENST00000502313 581 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AC008694.2-201ENST00000517591 306 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 IGKV2-23-201ENST00000518729 323 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 RNU6-988P-201ENST00000519081 107 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 HMGB1P41-201ENST00000520234 440 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 DEFB109D-201ENST00000529497 240 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AC109635.4-202ENST00000531666 412 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AC092470.1-201ENST00000546187 132 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AL117187.1-201ENST00000555482 181 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AC100830.2-201ENST00000581636 240 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 NF1P5-201ENST00000588287 448 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 NOL8P1-201ENST00000508336 3529 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 AC066616.2-201ENST00000559334 1481 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
BCAS3Q9H6U6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 BDP1P-201ENST00000582658 1990 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 RNU1-15P-201ENST00000353977 144 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 RNU6-1188P-201ENST00000363795 107 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 RN7SKP224-201ENST00000364140 325 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 SNORD82-201ENST00000365530 70 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 Y_RNA.378-201ENST00000365652 113 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 RNU6-196P-201ENST00000384315 107 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 RNU6-278P-201ENST00000390945 109 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AL360182.1-201ENST00000397433 468 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AL139397.2-201ENST00000404529 772 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 RPL37P10-201ENST00000412884 288 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AC012158.1-204ENST00000483430 465 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 CCDC34P1-201ENST00000507441 517 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AC017037.2-201ENST00000513850 890 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AC090136.1-201ENST00000520009 240 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AP000859.1-201ENST00000525536 307 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AC004817.2-201ENST00000561794 651 ntBASIC4.66□□□□□ -1.66
BCAS3Q9H6U6 AC124068.1-201ENST00000563131 678 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms