Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RNU6-741P-201ENST00000383889 107 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 RNU6-413P-201ENST00000384115 107 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 RNU6-1207P-201ENST00000384343 107 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 Z92545.1-201ENST00000411782 234 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 TPMTP3-201ENST00000411928 735 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 MTATP6P20-201ENST00000414147 562 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 BX119904.4-201ENST00000424402 301 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AL714022.1-201ENST00000439897 151 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 CBWD4P-201ENST00000445695 655 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 RPL30P9-201ENST00000465586 330 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC116337.2-201ENST00000477662 156 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC119751.4-201ENST00000507498 357 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 RNA5SP367-201ENST00000516557 118 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 HMGN1P28-201ENST00000521340 364 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC023813.2-201ENST00000564321 469 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 CYCSP39-201ENST00000565821 309 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC005498.1-201ENST00000592125 465 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC008277.2-201ENST00000605196 797 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 AC022336.2-201ENST00000568966 2538 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 RNU6-560P-201ENST00000364007 108 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 Y_RNA.548-201ENST00000384656 105 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AL365496.1-201ENST00000426885 215 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AC007919.1-201ENST00000429380 217 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 Z82210.1-201ENST00000440037 231 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 EEF1A1P39-201ENST00000440791 250 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AL049734.2-201ENST00000441066 616 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 RPS15AP27-201ENST00000449183 343 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AC005410.1-202ENST00000460347 485 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 RPS20P20-201ENST00000460498 340 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 MTND1P16-201ENST00000465177 898 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AC104563.1-201ENST00000476147 376 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 LARP1BP2-201ENST00000486594 519 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AIG1P1-201ENST00000503376 148 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AC097462.2-201ENST00000504623 481 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 MTCO3P13-201ENST00000577757 781 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 MIR4509-3-201ENST00000578671 94 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AC103810.1-201ENST00000579873 453 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 MIR4509-2-201ENST00000583920 94 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AL355877.2-201ENST00000603670 358 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 RNU4-5P-201ENST00000607255 135 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AL359198.2-201ENST00000611836 194 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AC107075.1-201ENST00000613695 314 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 MIR4509-1-201ENST00000618224 94 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 AL355596.1-201ENST00000565399 3996 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 DDX10P1-201ENST00000448545 1933 ntBASIC2.8□□□□□ -1.96
POLR1EQ9GZS1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 RNU6-343P-201ENST00000364709 104 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 MIR627-201ENST00000384979 97 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 RNU6-1242P-201ENST00000391052 103 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AL512633.1-201ENST00000399931 655 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AL138827.1-201ENST00000402666 306 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AL356421.1-201ENST00000403255 413 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 BX682237.1-201ENST00000415016 335 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 MTCO2P23-201ENST00000425216 680 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 USP9YP11-201ENST00000427537 717 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 SDR42E1P3-201ENST00000438345 502 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AC007327.1-201ENST00000447461 264 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AL031313.1-201ENST00000448435 256 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 MTND1P9-201ENST00000453775 944 ntBASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.79□□□□□ -1.96
POLR1EQ9GZS1 RPL31P41-201ENST00000477967 372 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms