Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.04□□□□□ -1.92
CCSER1Q9C0I3 AC009974.1-201ENST00000608881 455 ntBASIC3.04□□□□□ -1.92
CCSER1Q9C0I3 AC131902.3-201ENST00000611767 581 ntBASIC3.04□□□□□ -1.92
CCSER1Q9C0I3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.04□□□□□ -1.92
CCSER1Q9C0I3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCSER1Q9C0I3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCSER1Q9C0I3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCSER1Q9C0I3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 Y_RNA.234-201ENST00000364409 97 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 MIR9-1-201ENST00000385198 89 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 ANAPC10P1-201ENST00000395991 556 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 ERHP2-201ENST00000402323 299 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AC092573.2-201ENST00000434546 243 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 SNRPEP7-201ENST00000438350 220 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 RPL23AP76-201ENST00000441860 458 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 MRPL50P4-201ENST00000446432 475 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 SNRPGP6-201ENST00000451124 220 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AC005410.1-202ENST00000460347 485 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 MTND1P16-201ENST00000465177 898 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 RNU6-798P-201ENST00000516912 103 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 HMGN1P28-201ENST00000521340 364 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 OR6C7P-201ENST00000547875 934 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 ACTR3BP3-201ENST00000565577 979 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AL353997.4-201ENST00000586196 166 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 MIR6733-201ENST00000635723 61 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 AC012321.1-201ENST00000561622 1588 ntBASIC3.03□□□□□ -1.92
CCSER1Q9C0I3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AL022578.1-201ENST00000439330 1433 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 RNU6-97P-201ENST00000363387 104 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 RNU4-92P-201ENST00000363783 136 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 Y_RNA.311-201ENST00000365068 96 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 TAAR7P-201ENST00000436141 242 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 UBBP3-201ENST00000445497 241 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 MTND2P24-201ENST00000453434 806 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 SNORD121B-201ENST00000458838 81 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AC008837.2-201ENST00000513076 418 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 RN7SKP132-201ENST00000516001 208 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 CASP1P1-201ENST00000526345 212 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 GTF3AP2-201ENST00000557014 266 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AC023813.2-201ENST00000564321 469 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AC009712.1-201ENST00000564938 316 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 HMGB1P6-201ENST00000569046 646 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AC023043.3-201ENST00000593113 385 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 MTND3P19-201ENST00000603825 345 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AL450336.1-201ENST00000605180 586 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AC026790.2-201ENST00000606282 430 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AC004067.1-201ENST00000608733 700 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AC004852.3-201ENST00000614131 326 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AC008443.7-201ENST00000622195 246 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AC022336.2-201ENST00000568966 2538 ntBASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCSER1Q9C0I3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 DDX43P2-201ENST00000604753 1354 ntBASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 RNU6-621P-201ENST00000364752 109 ntBASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 RNU6-636P-201ENST00000384598 107 ntBASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 RPL21P75-201ENST00000396599 483 ntBASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 RPL21P28-201ENST00000401418 483 ntBASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 AL592114.1-201ENST00000403842 483 ntBASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 SSR1P2-201ENST00000415208 787 ntBASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 AC084290.1-201ENST00000434995 374 ntBASIC3.01□□□□□ -1.93
CCSER1Q9C0I3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms