Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AP001486.2-201ENST00000561652 5113 ntBASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 BRAFP1-201ENST00000445336 2703 ntBASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 RBMY1HP-201ENST00000382759 1389 ntBASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 AP004607.3-201ENST00000530354 3915 ntBASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 AL731532.2-201ENST00000623542 1953 ntBASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LCE3DQ9BYE3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RLIMP1-201ENST00000339626 1680 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AC139713.2-215ENST00000641428 5037 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RNU6-78P-201ENST00000362897 107 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 snoU2_19.2-201ENST00000363024 80 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RNU6-105P-201ENST00000363909 104 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 Y_RNA.200-201ENST00000364018 102 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RN7SKP171-201ENST00000364417 303 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 Y_RNA.237-201ENST00000364439 102 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RNU6-629P-201ENST00000384061 103 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RNU6-746P-201ENST00000384112 109 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RNU6-17P-201ENST00000384245 107 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 Y_RNA.477-201ENST00000384352 108 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RNU6-18P-201ENST00000384527 107 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RNA5SP156-201ENST00000410250 110 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RN7SKP221-201ENST00000410420 301 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RNU2-68P-201ENST00000410878 191 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RNU2-14P-201ENST00000411053 191 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 SNX18P13-201ENST00000412442 529 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 OR2AT2P-201ENST00000413438 905 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 TMEM167AP1-201ENST00000423409 219 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AC092047.1-201ENST00000424997 240 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AC099677.3-201ENST00000427081 395 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AC091286.1-201ENST00000431233 461 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AL645939.3-201ENST00000435408 225 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 RPL23AP22-201ENST00000437556 453 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 LINC02210-201ENST00000444561 288 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AC009237.8-201ENST00000445492 379 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AC005517.1-201ENST00000452091 489 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 SDC4P-201ENST00000453285 601 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 GEMIN2P1-201ENST00000454246 752 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AC099670.1-201ENST00000455141 783 ntBASIC1.55□□□□□ -2.16
LCE3DQ9BYE3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms