Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC068620.4-201ENST00000636730 1182 ntBASIC2.38□□□□□ -2.03
RSPO3Q9BXY4 AC010149.2-201ENST00000637608 315 ntBASIC2.38□□□□□ -2.03
RSPO3Q9BXY4 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.38□□□□□ -2.03
RSPO3Q9BXY4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
RSPO3Q9BXY4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RSPO3Q9BXY4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 RNU6-921P-201ENST00000384361 107 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 NUP35P1-201ENST00000422734 947 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AL139421.1-201ENST00000423010 169 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 UBE2D3P2-201ENST00000424409 445 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AL593851.1-201ENST00000426171 157 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC063976.3-201ENST00000426849 329 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC105272.1-201ENST00000438604 198 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AL606662.1-201ENST00000445763 553 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC108938.1-201ENST00000451204 136 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 RNY4P37-201ENST00000516225 96 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 RNU6-1261P-201ENST00000517194 104 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC087373.1-201ENST00000524920 491 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AP002770.2-201ENST00000543613 532 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC090502.2-201ENST00000549267 280 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC107954.1-201ENST00000565906 727 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC093519.1-201ENST00000566109 298 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC138761.3-201ENST00000579993 334 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC020895.1-201ENST00000595362 272 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 VN1R90P-201ENST00000595717 726 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AL356575.1-201ENST00000603008 283 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC021171.1-201ENST00000603137 706 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC136601.2-201ENST00000604356 474 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC018638.7-201ENST00000605836 1114 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC005332.6-201ENST00000613178 446 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 MIR6715A-201ENST00000615929 79 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC010297.1-201ENST00000623948 149 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AL359757.2-201ENST00000624309 274 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC007490.1-201ENST00000624321 703 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 AC026634.1-201ENST00000634369 198 ntBASIC2.37□□□□□ -2.03
RSPO3Q9BXY4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 Y_RNA.169-201ENST00000363745 96 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 RNU6-621P-201ENST00000364752 109 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 RNU1-100P-201ENST00000365255 165 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 RNU6-444P-201ENST00000383988 108 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 RNU6-837P-201ENST00000391056 108 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AL049545.1-201ENST00000401856 572 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 MTCO3P1-205ENST00000422088 832 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC019097.1-201ENST00000424783 735 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 RPS6P15-201ENST00000431996 751 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 UBE2D3P1-201ENST00000436669 444 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC241584.1-201ENST00000438469 1241 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 RPS24P13-201ENST00000442520 397 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 MTATP6P26-201ENST00000445926 662 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 MTCO2P25-201ENST00000447065 681 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 MTCYBP11-201ENST00000447254 1109 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AL133217.1-201ENST00000450980 425 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AP000705.1-201ENST00000454567 350 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 snoU13.4-201ENST00000458916 104 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 RPL7P18-201ENST00000478965 734 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 RPS3AP22-201ENST00000488297 769 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AIG1P1-201ENST00000503376 148 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 HMGB1P28-201ENST00000507778 552 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC010587.2-201ENST00000511727 448 ntBASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.36□□□□□ -2.03
RSPO3Q9BXY4 SNORA3.4-201ENST00000515969 96 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms