Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 SUB1P1-201ENST00000524415 382 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AL355836.1-201ENST00000555951 870 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC090615.1-201ENST00000577519 154 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 VN1R87P-201ENST00000596706 487 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AP001429.1-201ENST00000602568 530 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 NRBF2P5-201ENST00000603087 788 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC005776.1-201ENST00000603164 290 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AL445435.1-201ENST00000604232 665 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC079395.3-201ENST00000615161 484 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC109454.4-201ENST00000623411 649 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 SDAD1P2-201ENST00000441308 2028 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 ANKRD36P1-201ENST00000344424 659 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 MIR144-201ENST00000384886 86 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 MIR514A1-201ENST00000385133 98 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 RPL7P27-201ENST00000403775 720 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.8□□□□□ -2.12
UPK3BQ9BT76 BTF3P8-201ENST00000414577 526 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 MTCO1P3-201ENST00000429327 192 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 DDX3P2-201ENST00000446138 111 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 MRPL50P4-201ENST00000446432 475 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC126182.1-201ENST00000478134 357 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.8□□□□□ -2.12
UPK3BQ9BT76 TTC39CP1-201ENST00000512513 755 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.8□□□□□ -2.12
UPK3BQ9BT76 SCARNA15.2-201ENST00000516409 127 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 RNA5SP471-201ENST00000516971 106 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC104417.1-201ENST00000523974 751 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 MTCO3P15-201ENST00000526563 574 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 COX6CP5-201ENST00000527162 228 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.8□□□□□ -2.12
UPK3BQ9BT76 GLYCAM1-201ENST00000546596 285 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC124947.2-202ENST00000552735 133 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 PRELID2P1-201ENST00000552837 301 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.8□□□□□ -2.12
UPK3BQ9BT76 MIR4635-201ENST00000583759 79 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 OR1M4P-201ENST00000589199 287 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AL355877.2-201ENST00000603670 358 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC011451.2-201ENST00000604303 598 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC026790.2-201ENST00000606282 430 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC005046.1-201ENST00000608515 625 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC004067.1-201ENST00000608733 700 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 MIR6895-201ENST00000613497 78 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AL596245.1-201ENST00000618994 362 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 MIR6130-201ENST00000619419 109 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC084824.4-201ENST00000620106 731 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC008443.7-201ENST00000622195 246 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 MIR1322-201ENST00000638013 71 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AL356473.1-201ENST00000406203 1408 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.8□□□□□ -2.12
UPK3BQ9BT76 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
UPK3BQ9BT76 OR4G2P-202ENST00000641004 1759 ntBASIC1.8□□□□□ -2.12
UPK3BQ9BT76 AC007785.2-201ENST00000598627 1916 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AL139276.1-201ENST00000311910 1001 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 RNU6-236P-201ENST00000363886 106 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 SNORD65.1-201ENST00000390889 71 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 U3.20-201ENST00000390909 217 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 RNA5SP80-201ENST00000410475 111 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AC007064.1-201ENST00000412238 351 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 RPLP0P7-201ENST00000416050 667 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 Z75741.2-201ENST00000417272 1167 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AL513175.2-201ENST00000422071 443 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 MTCO2P5-201ENST00000422621 426 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 OR4K11P-201ENST00000431829 904 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 SDCBPP1-201ENST00000440192 890 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 BMI1P1-201ENST00000445879 941 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 RPS3P1-201ENST00000456781 192 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 RBM43P1-201ENST00000476891 1081 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 TMEM251P1-201ENST00000503717 318 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms