Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AC027176.1-201ENST00000560204 514 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AC012435.1-202ENST00000568772 240 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 MIR3160-1-201ENST00000577972 85 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AC015688.2-201ENST00000584523 262 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AP001269.3-201ENST00000588718 329 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 VN1R92P-201ENST00000598511 928 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AL589743.7-201ENST00000612637 233 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 MIR6132-201ENST00000622083 109 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 MIR1291-201ENST00000627649 87 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 AC017104.5-201ENST00000637647 639 ntBASIC1.35□□□□□ -2.19
VPS25Q9BRG1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
VPS25Q9BRG1 RNA5SP267-201ENST00000364893 126 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 RNU1-140P-201ENST00000365040 165 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 SNORD82-201ENST00000365530 70 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 RNU6-891P-201ENST00000384280 111 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AL158156.1-201ENST00000422509 473 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 UBE2D3P1-201ENST00000436669 444 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 GTF2IP7-202ENST00000436677 309 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AL049734.2-201ENST00000441066 616 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AC092685.1-201ENST00000447960 1243 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 RPS27P23-201ENST00000487608 251 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AP000926.3-201ENST00000497201 299 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AC138853.1-201ENST00000503549 823 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 OR5AK1P-201ENST00000524837 922 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AC106785.1-201ENST00000565935 262 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AL354943.1-201ENST00000572103 781 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AC091925.2-201ENST00000625059 256 ntBASIC1.34□□□□□ -2.19
VPS25Q9BRG1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
VPS25Q9BRG1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
VPS25Q9BRG1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 RNU6-543P-201ENST00000362576 108 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 U3.13-201ENST00000364804 214 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 MIR183-201ENST00000384958 110 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 RPP40P1-201ENST00000426762 456 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 RPS15AP5-201ENST00000436276 388 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 MTCO1P48-201ENST00000448024 1096 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 RPL36AP51-201ENST00000487216 318 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 HMGB1P36-201ENST00000487709 576 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 HMGB1P47-201ENST00000511281 589 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 RNA5SP320-201ENST00000516263 124 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AC079600.2-201ENST00000550076 130 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AC022254.1-201ENST00000567857 235 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AC136624.4-201ENST00000573044 370 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AC103810.8-201ENST00000607347 118 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 MIR7975-201ENST00000619350 68 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AC009318.4-201ENST00000620496 486 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 AC008432.1-201ENST00000615912 1320 ntBASIC1.33□□□□□ -2.2
VPS25Q9BRG1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
VPS25Q9BRG1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
VPS25Q9BRG1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS25Q9BRG1 Z99496.1-201ENST00000469424 1477 ntBASIC1.32□□□□□ -2.2
VPS25Q9BRG1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
VPS25Q9BRG1 SNORD51-201ENST00000384320 80 ntBASIC1.32□□□□□ -2.2
VPS25Q9BRG1 RNU6-748P-201ENST00000384648 107 ntBASIC1.32□□□□□ -2.2
VPS25Q9BRG1 U6atac.2-201ENST00000408644 118 ntBASIC1.32□□□□□ -2.2
VPS25Q9BRG1 AC096649.2-201ENST00000416186 393 ntBASIC1.32□□□□□ -2.2
VPS25Q9BRG1 KRR1P1-201ENST00000419430 803 ntBASIC1.32□□□□□ -2.2
VPS25Q9BRG1 PAICSP7-201ENST00000419829 962 ntBASIC1.32□□□□□ -2.2
VPS25Q9BRG1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS25Q9BRG1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.32□□□□□ -2.2
VPS25Q9BRG1 AL357134.1-201ENST00000445848 426 ntBASIC1.32□□□□□ -2.2
VPS25Q9BRG1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms