Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.09□□□□□ -2.23
SPENQ96T58 AC097468.3-201ENST00000607956 456 ntBASIC1.09□□□□□ -2.23
SPENQ96T58 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.23
SPENQ96T58 AL358176.2-201ENST00000425769 204 ntBASIC1.09□□□□□ -2.24
SPENQ96T58 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.09□□□□□ -2.24
SPENQ96T58 NPM1P52-201ENST00000518264 846 ntBASIC1.09□□□□□ -2.24
SPENQ96T58 OR8X1P-201ENST00000534542 869 ntBASIC1.09□□□□□ -2.24
SPENQ96T58 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
SPENQ96T58 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
SPENQ96T58 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.09□□□□□ -2.24
SPENQ96T58 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.09□□□□□ -2.24
SPENQ96T58 AL445183.3-201ENST00000414168 502 ntBASIC1.09□□□□□ -2.24
SPENQ96T58 AL096701.2-201ENST00000416920 238 ntBASIC1.09□□□□□ -2.24
SPENQ96T58 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.09□□□□□ -2.24
SPENQ96T58 AC139103.1-201ENST00000534696 1030 ntBASIC1.09□□□□□ -2.24
SPENQ96T58 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.09□□□□□ -2.24
SPENQ96T58 AC121758.2-201ENST00000553271 193 ntBASIC1.09□□□□□ -2.24
SPENQ96T58 AC009452.1-201ENST00000640823 606 ntBASIC1.09□□□□□ -2.24
SPENQ96T58 MTND5P9-201ENST00000503854 1755 ntBASIC1.08□□□□□ -2.24
SPENQ96T58 AL139109.1-201ENST00000455491 297 ntBASIC1.08□□□□□ -2.24
SPENQ96T58 KATNBL1P4-201ENST00000503545 918 ntBASIC1.08□□□□□ -2.24
SPENQ96T58 AC113155.1-201ENST00000511141 769 ntBASIC1.08□□□□□ -2.24
SPENQ96T58 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.08□□□□□ -2.24
SPENQ96T58 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
SPENQ96T58 VN1R107P-201ENST00000601784 209 ntBASIC1.08□□□□□ -2.24
SPENQ96T58 RNU6-35P-201ENST00000384530 107 ntBASIC1.08□□□□□ -2.24
SPENQ96T58 RNU2-37P-201ENST00000410695 177 ntBASIC1.08□□□□□ -2.24
SPENQ96T58 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
SPENQ96T58 AP001029.3-201ENST00000588063 596 ntBASIC1.08□□□□□ -2.24
SPENQ96T58 AC090740.1-201ENST00000623193 2262 ntBASIC1.08□□□□□ -2.24
SPENQ96T58 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SPENQ96T58 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SPENQ96T58 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.07□□□□□ -2.24
SPENQ96T58 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SPENQ96T58 AL357078.2-201ENST00000416486 427 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 AC107032.1-201ENST00000485945 480 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 AC022447.3-201ENST00000506865 495 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 AC118942.1-201ENST00000529674 1035 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.07□□□□□ -2.24
SPENQ96T58 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.07□□□□□ -2.24
SPENQ96T58 AC080100.1-201ENST00000624239 5356 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SPENQ96T58 Y_RNA.85-201ENST00000363014 111 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 SNORA18.2-201ENST00000383865 132 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 AC092832.1-201ENST00000422934 400 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 AC009965.2-201ENST00000425328 970 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 AC010265.1-201ENST00000513509 211 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 CBX3P2-202ENST00000583365 535 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 U73023.1-201ENST00000603134 700 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 AC016877.3-201ENST00000606778 504 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 uc_338.12-201ENST00000616344 181 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 RNA5SP167-201ENST00000365461 116 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 TXNP7-201ENST00000406296 293 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 AL445687.1-201ENST00000439946 251 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.07□□□□□ -2.24
SPENQ96T58 PTGES3P5-201ENST00000455109 434 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 RPL23AP41-201ENST00000484754 458 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SPENQ96T58 RNA5SP82-201ENST00000516707 92 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 AC116618.1-201ENST00000634617 774 ntBASIC1.07□□□□□ -2.24
SPENQ96T58 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
SPENQ96T58 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
SPENQ96T58 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SPENQ96T58 RNU6-178P-201ENST00000384631 104 ntBASIC1.06□□□□□ -2.24
SPENQ96T58 AC244636.1-201ENST00000421152 228 ntBASIC1.06□□□□□ -2.24
SPENQ96T58 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.06□□□□□ -2.24
SPENQ96T58 AC090515.1-201ENST00000465295 476 ntBASIC1.06□□□□□ -2.24
SPENQ96T58 AP005435.4-201ENST00000529514 284 ntBASIC1.06□□□□□ -2.24
SPENQ96T58 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
SPENQ96T58 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
SPENQ96T58 RPL23AP35-201ENST00000451906 501 ntBASIC1.06□□□□□ -2.24
SPENQ96T58 RPS26P21-201ENST00000475397 348 ntBASIC1.06□□□□□ -2.24
SPENQ96T58 RPS27AP10-201ENST00000496103 208 ntBASIC1.06□□□□□ -2.24
SPENQ96T58 AC093801.2-201ENST00000503966 1050 ntBASIC1.06□□□□□ -2.24
SPENQ96T58 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.06□□□□□ -2.24
SPENQ96T58 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SPENQ96T58 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SPENQ96T58 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.05□□□□□ -2.24
SPENQ96T58 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.05□□□□□ -2.24
SPENQ96T58 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SPENQ96T58 RN7SKP200-201ENST00000410564 320 ntBASIC1.05□□□□□ -2.24
SPENQ96T58 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.05□□□□□ -2.24
SPENQ96T58 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.05□□□□□ -2.24
SPENQ96T58 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.05□□□□□ -2.24
SPENQ96T58 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
SPENQ96T58 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SPENQ96T58 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SPENQ96T58 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.05□□□□□ -2.24
SPENQ96T58 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.05□□□□□ -2.24
SPENQ96T58 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.05□□□□□ -2.24
SPENQ96T58 HMGN2P20-201ENST00000437531 273 ntBASIC1.05□□□□□ -2.24
SPENQ96T58 RNA5SP330-201ENST00000517096 96 ntBASIC1.05□□□□□ -2.24
SPENQ96T58 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.05□□□□□ -2.24
SPENQ96T58 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.05□□□□□ -2.24
SPENQ96T58 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.05□□□□□ -2.24
SPENQ96T58 MIR591-201ENST00000385290 95 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 SUMO2P12-201ENST00000405924 140 ntBASIC1.04□□□□□ -2.24
SPENQ96T58 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.04□□□□□ -2.24
SPENQ96T58 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.04□□□□□ -2.24
SPENQ96T58 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms