Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 SNORA31.26-201ENST00000517250 137 ntBASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 AL445493.3-201ENST00000619568 477 ntBASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 BOLA3P3-201ENST00000505182 232 ntBASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 RNA5SP384-201ENST00000516615 116 ntBASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 NPM1P52-201ENST00000518264 846 ntBASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 AL161713.1-201ENST00000555538 145 ntBASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 uc_338.20-201ENST00000621563 178 ntBASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 AC011477.1-204ENST00000623416 1325 ntBASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
CSMD1Q96PZ7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CSMD1Q96PZ7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.09□□□□□ -2.24
CSMD1Q96PZ7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.09□□□□□ -2.24
CSMD1Q96PZ7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.09□□□□□ -2.24
CSMD1Q96PZ7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.09□□□□□ -2.24
CSMD1Q96PZ7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 RPS27AP10-201ENST00000496103 208 ntBASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 AC090740.1-201ENST00000623193 2262 ntBASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 CFTRP1-201ENST00000456646 183 ntBASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 AC107918.3-201ENST00000533272 382 ntBASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 AC007375.1-201ENST00000554513 578 ntBASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 BX322635.1-201ENST00000605804 496 ntBASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 AC135776.4-201ENST00000624300 1904 ntBASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 MIR1304-201ENST00000408243 91 ntBASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 CYCSP33-201ENST00000414485 327 ntBASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 TRAV31-201ENST00000502780 342 ntBASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 AC090821.2-201ENST00000523552 176 ntBASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CSMD1Q96PZ7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 Y_RNA.549-201ENST00000384657 102 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 AC244636.1-201ENST00000421152 228 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 USP9YP7-201ENST00000436723 430 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 HMGN2P20-201ENST00000437531 273 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 USP9YP32-201ENST00000452432 430 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 AC090515.1-201ENST00000465295 476 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 OR9N1P-202ENST00000494289 481 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 RNA5SP82-201ENST00000516707 92 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 AC007229.1-201ENST00000590455 412 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 AL020996.3-201ENST00000606617 222 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 SNORA18.2-201ENST00000383865 132 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 RNU1-148P-201ENST00000384472 162 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 RPL23AP41-201ENST00000484754 458 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 AC010265.1-201ENST00000513509 211 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 RNU6-670P-201ENST00000364312 104 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 AL357078.2-201ENST00000416486 427 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 AC008427.1-201ENST00000503102 655 ntBASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.07□□□□□ -2.24
CSMD1Q96PZ7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 SNRPGP13-201ENST00000442212 177 ntBASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 Y_RNA.324-201ENST00000365165 102 ntBASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 AP000560.1-201ENST00000624150 1937 ntBASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 AC096571.1-202ENST00000506634 735 ntBASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 RNU11-2P-201ENST00000516898 142 ntBASIC1.06□□□□□ -2.24
CSMD1Q96PZ7 SNORA79B-201ENST00000410557 148 ntBASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 ARL5AP2-201ENST00000444698 533 ntBASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 OR4V1P-201ENST00000525394 1140 ntBASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 AC121758.2-201ENST00000553271 193 ntBASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 AC017076.1-201ENST00000607613 578 ntBASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 AL136164.4-201ENST00000625013 2135 ntBASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 Y_RNA.488-201ENST00000384403 102 ntBASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 RNU2-25P-201ENST00000411041 191 ntBASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 AC073264.1-201ENST00000411508 416 ntBASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 AL445687.1-201ENST00000439946 251 ntBASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.05□□□□□ -2.24
CSMD1Q96PZ7 SUMO2P12-201ENST00000405924 140 ntBASIC1.04□□□□□ -2.24
CSMD1Q96PZ7 MIR1197-201ENST00000408818 88 ntBASIC1.04□□□□□ -2.24
CSMD1Q96PZ7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.04□□□□□ -2.24
CSMD1Q96PZ7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms