Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX27Q96L92 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SNX27Q96L92 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SNX27Q96L92 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX27Q96L92 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX27Q96L92 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX27Q96L92 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX27Q96L92 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SNX27Q96L92 RNU5E-1-201ENST00000362477 120 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 RNU6-432P-201ENST00000384196 109 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 RNU6-278P-201ENST00000390945 109 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 RPL23AP32-201ENST00000395315 459 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 RNU2-43P-201ENST00000410306 190 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX27Q96L92 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX27Q96L92 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX27Q96L92 AC087650.1-201ENST00000431445 468 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC104850.1-201ENST00000435940 476 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 RPL35AP22-201ENST00000436855 335 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX27Q96L92 AF228730.2-201ENST00000438784 848 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX27Q96L92 USP9YP15-201ENST00000442391 422 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 MTCO3P20-201ENST00000454926 688 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC010285.1-201ENST00000470580 392 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 RPS3AP17-201ENST00000472594 777 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX27Q96L92 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC078817.1-201ENST00000492623 435 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 RPL7P47-201ENST00000497299 556 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC135721.1-201ENST00000497954 479 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNX27Q96L92 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX27Q96L92 AC026801.2-201ENST00000515352 425 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX27Q96L92 HMGN1P28-201ENST00000521340 364 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX27Q96L92 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNX27Q96L92 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.09□□□□□ -1.75
SNX27Q96L92 AP000857.1-201ENST00000532151 543 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC007458.1-201ENST00000542812 373 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.09□□□□□ -1.75
SNX27Q96L92 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.09□□□□□ -1.75
SNX27Q96L92 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX27Q96L92 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX27Q96L92 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX27Q96L92 AL137849.1-201ENST00000604767 169 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 RNU1-30P-201ENST00000606575 163 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC245517.5-201ENST00000611529 162 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC095031.1-201ENST00000623685 672 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 AC068880.5-201ENST00000624331 290 ntBASIC4.09□□□□□ -1.75
SNX27Q96L92 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX27Q96L92 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX27Q96L92 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.09□□□□□ -1.75
SNX27Q96L92 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SNX27Q96L92 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SNX27Q96L92 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
SNX27Q96L92 Y_RNA.118-201ENST00000363300 101 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX27Q96L92 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX27Q96L92 AL445529.1-201ENST00000398713 389 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 RNA5SP120-201ENST00000410900 112 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX27Q96L92 EI24P1-201ENST00000416584 867 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX27Q96L92 AC079780.1-201ENST00000428259 207 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AL358934.1-201ENST00000432346 324 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX27Q96L92 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX27Q96L92 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AC108059.3-201ENST00000456388 214 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 RNU7-59P-201ENST00000459101 61 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 RBM43P1-201ENST00000476891 1081 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX27Q96L92 AC107401.1-201ENST00000503426 685 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 HMGB1P22-201ENST00000505315 124 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SNX27Q96L92 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX27Q96L92 DEFB108D-201ENST00000527787 222 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SNX27Q96L92 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SNX27Q96L92 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX27Q96L92 AL133153.1-201ENST00000557756 303 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX27Q96L92 AC012182.1-201ENST00000570133 895 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AL391840.1-201ENST00000571144 367 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX27Q96L92 MIR4325-201ENST00000583049 90 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX27Q96L92 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX27Q96L92 AC025165.5-201ENST00000602802 578 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AC245014.2-201ENST00000603689 287 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AL022099.1-201ENST00000604551 712 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AC246785.4-201ENST00000605374 287 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX27Q96L92 AL110115.1-201ENST00000614396 364 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AC068792.1-201ENST00000621354 417 ntBASIC4.08□□□□□ -1.76
SNX27Q96L92 AL353748.2-201ENST00000622148 471 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms