Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 ERHP2-201ENST00000402323 299 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC47Q96A33 AL513475.1-201ENST00000406602 315 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 RPS3AP37-201ENST00000419176 745 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 AC091390.3-201ENST00000426478 338 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 ZYG11AP1-201ENST00000430329 837 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 ATP5F1P1-201ENST00000433775 569 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC47Q96A33 RPS29P6-201ENST00000438196 145 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 RPS15AP7-201ENST00000439294 405 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 PIGFP3-201ENST00000441918 722 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 AC112653.1-201ENST00000443851 386 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 MTND1P9-201ENST00000453775 944 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 ATG12P2-201ENST00000456830 416 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 RPS27AP9-201ENST00000477681 438 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC47Q96A33 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC47Q96A33 AC113155.1-201ENST00000511141 769 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC47Q96A33 RNA5SP341-201ENST00000516261 117 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 RN7SKP57-201ENST00000517248 293 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC47Q96A33 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC47Q96A33 AC006270.3-201ENST00000605967 1036 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC47Q96A33 MIR8057-201ENST00000620957 69 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 AC009268.2-201ENST00000621925 457 ntBASIC3.14□□□□□ -1.91
CCDC47Q96A33 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC47Q96A33 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC47Q96A33 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC47Q96A33 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC47Q96A33 AL138713.1-201ENST00000624026 2130 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC47Q96A33 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC47Q96A33 RNU6-744P-201ENST00000365557 107 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 RNU6-1316P-201ENST00000384242 108 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AL136310.1-201ENST00000404926 654 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC47Q96A33 RNU6-516P-201ENST00000411381 104 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC47Q96A33 MTATP6P20-201ENST00000414147 562 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC47Q96A33 AC092047.1-201ENST00000424997 240 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AC098614.2-201ENST00000426040 255 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AL671855.1-201ENST00000446875 1203 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC47Q96A33 AP1S2P1-201ENST00000457344 379 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AC008716.1-201ENST00000511084 513 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC47Q96A33 AC024589.1-201ENST00000512207 263 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC47Q96A33 AP000857.1-201ENST00000532151 543 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC47Q96A33 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC47Q96A33 OR1M4P-201ENST00000589199 287 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC47Q96A33 AC008277.2-201ENST00000605196 797 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AL158050.2-201ENST00000605336 568 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AC245297.2-201ENST00000610119 565 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AC107075.1-201ENST00000613695 314 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AC079395.3-201ENST00000615161 484 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 AC004777.1-201ENST00000624317 287 ntBASIC3.13□□□□□ -1.91
CCDC47Q96A33 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC47Q96A33 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC47Q96A33 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC47Q96A33 AC092447.10-201ENST00000620607 1652 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC47Q96A33 AL109755.1-201ENST00000401791 649 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC47Q96A33 RPL35AP12-201ENST00000425362 338 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC47Q96A33 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC47Q96A33 SNRPEP7-201ENST00000438350 220 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 FGF7P5-201ENST00000441829 291 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC47Q96A33 RPL37P4-201ENST00000448908 268 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 KC877373.1-201ENST00000479066 408 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 AC138853.1-201ENST00000503549 823 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 AC022447.3-201ENST00000506865 495 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC47Q96A33 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC47Q96A33 AC090616.3-201ENST00000582184 217 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 AC024153.1-201ENST00000603103 365 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 MTND3P19-201ENST00000603825 345 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 AL139344.1-201ENST00000605228 195 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 AL121652.1-201ENST00000608851 448 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 AC093838.1-201ENST00000613014 469 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC47Q96A33 AC019226.1-201ENST00000625666 515 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 MIR3651-201ENST00000630427 90 ntBASIC3.12□□□□□ -1.91
CCDC47Q96A33 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC47Q96A33 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC47Q96A33 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC47Q96A33 Y_RNA.192-201ENST00000363977 102 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 SNORD116.1-201ENST00000365628 92 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 RNU6-217P-201ENST00000384164 104 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 TAS2R15P-201ENST00000390674 928 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 MTND4P13-201ENST00000402078 1023 ntBASIC3.11□□□□□ -1.91
CCDC47Q96A33 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms