Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FTH1P2-201ENST00000466086 412 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 RPL31P41-201ENST00000477967 372 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 AC055855.1-201ENST00000489563 579 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3□□□□□ -1.93
PTP4A1Q93096 IGKV2-26-201ENST00000518305 343 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3□□□□□ -1.93
PTP4A1Q93096 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3□□□□□ -1.93
PTP4A1Q93096 OR5B10P-201ENST00000532869 642 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3□□□□□ -1.93
PTP4A1Q93096 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3□□□□□ -1.93
PTP4A1Q93096 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3□□□□□ -1.93
PTP4A1Q93096 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3□□□□□ -1.93
PTP4A1Q93096 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3□□□□□ -1.93
PTP4A1Q93096 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3□□□□□ -1.93
PTP4A1Q93096 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3□□□□□ -1.93
PTP4A1Q93096 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3□□□□□ -1.93
PTP4A1Q93096 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3□□□□□ -1.93
PTP4A1Q93096 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3□□□□□ -1.93
PTP4A1Q93096 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3□□□□□ -1.93
PTP4A1Q93096 AL356321.1-201ENST00000621360 228 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3□□□□□ -1.93
PTP4A1Q93096 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3□□□□□ -1.93
PTP4A1Q93096 AC127502.3-201ENST00000636170 1206 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PTP4A1Q93096 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PTP4A1Q93096 AC006378.2-201ENST00000623178 2476 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTP4A1Q93096 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTP4A1Q93096 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 RNA5SP197-201ENST00000363357 119 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 RNU6-1284P-201ENST00000363701 100 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 RNU4-28P-201ENST00000364739 141 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 SNORD17-201ENST00000390930 237 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 RPL21P3-201ENST00000395517 478 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 BTF3L4P3-201ENST00000418879 476 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 HMGB1P27-201ENST00000431429 603 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 ATP5JP1-201ENST00000431631 322 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 AC092641.1-201ENST00000440229 772 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 CYCSP32-201ENST00000440548 321 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 UBBP3-201ENST00000445497 241 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 AL358232.1-201ENST00000448030 501 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 RBMY2UP-201ENST00000453474 324 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 AC146507.2-201ENST00000460608 476 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 RNU1-143P-201ENST00000516296 146 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 SCARNA20.6-201ENST00000517251 106 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 DEFB108A-201ENST00000530110 222 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 NACAP3-201ENST00000552100 481 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 MIR3158-1-201ENST00000583596 81 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 U1.23-201ENST00000610293 146 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 AL139418.1-201ENST00000613613 177 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 AC004696.1-201ENST00000614345 607 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 AC079395.3-201ENST00000615161 484 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 RNU1-68P-201ENST00000615382 146 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 U1.39-201ENST00000621562 146 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 AC084035.1-201ENST00000634543 607 ntBASIC2.99□□□□□ -1.93
PTP4A1Q93096 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTP4A1Q93096 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PTP4A1Q93096 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTP4A1Q93096 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTP4A1Q93096 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PTP4A1Q93096 AL359693.1-201ENST00000614959 2407 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 RNU6-884P-201ENST00000363889 107 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 U3.11-201ENST00000364476 212 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 RNU6-1180P-201ENST00000364935 107 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 SNORA51.4-201ENST00000364993 124 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 U8.9-201ENST00000365667 134 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PTP4A1Q93096 FO393413.1-201ENST00000402892 195 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 RPS29P4-201ENST00000414733 161 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 VPS26BP1-201ENST00000417155 755 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.98□□□□□ -1.93
PTP4A1Q93096 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.98□□□□□ -1.93
PTP4A1Q93096 AL445669.1-201ENST00000426743 755 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 SNRPEP9-201ENST00000436794 238 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 Z80107.1-201ENST00000436830 412 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 AC005094.1-201ENST00000440420 368 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.98□□□□□ -1.93
PTP4A1Q93096 PDSS1P2-201ENST00000449397 678 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 MTND2P14-201ENST00000482139 351 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.98□□□□□ -1.93
PTP4A1Q93096 RPL36AP51-201ENST00000487216 318 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 AC006499.5-201ENST00000505037 514 ntBASIC2.98□□□□□ -1.93
PTP4A1Q93096 SUMO2P6-201ENST00000505273 288 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms