Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL451142.2-201ENST00000429076 2090 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 IRF5P1-201ENST00000504852 2164 ntBASIC4.47□□□□□ -1.69
NUP43Q8NFH3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
NUP43Q8NFH3 AL136164.3-201ENST00000624429 3978 ntBASIC4.46□□□□□ -1.69
NUP43Q8NFH3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
NUP43Q8NFH3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
NUP43Q8NFH3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
NUP43Q8NFH3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AL672167.1-205ENST00000641112 3080 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 RN7SKP104-201ENST00000362605 328 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 RNU6-1059P-201ENST00000363752 98 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 Y_RNA.389-201ENST00000383924 113 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 Y_RNA.556-201ENST00000384677 113 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 RNU6-1109P-201ENST00000391187 107 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AC110754.1-201ENST00000399740 601 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AC099677.1-201ENST00000420575 175 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 ELOCP18-201ENST00000434209 337 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 PSMD10P3-201ENST00000437000 448 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 NEFMP1-201ENST00000443423 1006 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AURKAPS2-201ENST00000454983 333 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 HMGB3P30-201ENST00000457863 606 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 RNA5SP103-201ENST00000459503 118 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 RPS3AP41-201ENST00000462701 778 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 VN1R105P-201ENST00000486595 910 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AC096745.1-201ENST00000509945 370 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AC025423.5-201ENST00000550230 219 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 FAM27B-201ENST00000610601 213 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AC139713.2-215ENST00000641428 5037 ntBASIC4.46□□□□□ -1.7
NUP43Q8NFH3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP43Q8NFH3 MAPK10-320ENST00000641462 6696 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 AC091812.1-201ENST00000432235 1948 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 RNU6-450P-201ENST00000364654 107 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 SNORA23-201ENST00000365128 182 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 DEFB109C-201ENST00000382575 264 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 DEFB109B-201ENST00000382656 264 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 RNU6-1026P-201ENST00000384465 108 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 CYB5AP4-201ENST00000396692 399 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 AL080315.1-201ENST00000406055 466 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 AL645608.4-201ENST00000423619 154 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 AC092451.1-201ENST00000480211 153 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 RNU6-475P-201ENST00000516073 104 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 RNU1-6P-201ENST00000516290 144 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 RNU4-77P-201ENST00000516692 156 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 Y_RNA.721-201ENST00000517207 102 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 AC021006.3-201ENST00000530771 192 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 AP003385.6-201ENST00000531603 374 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 AC104763.2-201ENST00000604179 382 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 AC100812.1-201ENST00000607622 580 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.45□□□□□ -1.7
NUP43Q8NFH3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUP43Q8NFH3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RNU1-83P-201ENST00000363426 164 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RNU6-263P-201ENST00000363811 107 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 RNU6-99P-201ENST00000364721 107 ntBASIC4.44□□□□□ -1.7
NUP43Q8NFH3 Y_RNA.307-201ENST00000365022 117 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 242.5 ms